RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 FBXO16Q8IX29 292 aaPredicted RBP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 TP53INP2Q8IXH6 220 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 TTC8Q8TAM2 541 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 PLEKHO2Q8TD55 490 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 SH3RF2Q8TEC5 729 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 CHURC1Q8WUH1 139 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 TMEM169Q96HH4 297 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 AHCYL2Q96HN2 611 aaKnown RBP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 FUBP3Q96I24 572 aaKnown RBP eCLIP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 CTAGE1Q96RT6 745 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 JAM3Q9BX67 310 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 EPB41L1Q9H4G0 881 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 EPB41L4AQ9HCS5 686 aaPredicted RBP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 ZBTB40Q9NUA8 1239 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 VAV3Q9UKW4 847 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 DDX49Q9Y6V7 483 aaKnown RBP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 MCM3APO60318 1980 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 TCF20Q9UGU0 1960 aaKnown RBP5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 GBF1Q92538 1859 aa5.41□□□□□ -1.54
CDC42EP3-202ENST00000422687 SCN10AQ9Y5Y9 1956 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 TMEM232C9JQI7 657 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 CXCL10P02778 98 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ACTN1P12814 892 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ITGB5P18084 799 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 EDNRBP24530 442 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 FPR2P25090 351 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 STAT2P52630 851 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 IRF9Q00978 393 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 PRKCQQ04759 706 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 SMAD2Q15796 467 aaKnown RBP5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 LEXMQ3ZCV2 418 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 MUM1L1Q5H9M0 696 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 CXorf57Q6NSI4 855 aaKnown RBP5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 BTNL9Q6UXG8 535 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ARHGAP36Q6ZRI8 547 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 CEP68Q76N32 757 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 SPRED2Q7Z698 418 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 C14orf80Q86SX3 495 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 SESTD1Q86VW0 696 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 KBTBD3Q8NAB2 608 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 C1orf162Q8NEQ5 155 aaPredicted RBP5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ASB11Q8WXH4 323 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ARNTL2Q8WYA1 636 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 HRASLS5Q96KN8 279 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 JMJD8Q96S16 334 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 KCNJ15Q99712 375 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 MTG1Q9BT17 334 aaPredicted RBP5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 CERS4Q9HA82 394 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ZNF287Q9HBT7 754 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 GULP1Q9UBP9 304 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 EBF1Q9UH73 591 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 ZNF180Q9UJW8 692 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 CTDP1Q9Y5B0 961 aaPredicted RBP5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 B3GALT1Q9Y5Z6 326 aa5.4□□□□□ -1.54
CDC42EP3-202ENST00000422687 MYH8P13535 1937 aa5.4□□□□□ -1.55
CDC42EP3-202ENST00000422687 LCHNA4D1U4 455 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 KIF28PB7ZC32 967 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 NKRFO15226 690 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 PRPF3O43395 683 aaKnown RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 HMMRO75330 724 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 PRDM1O75626 825 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 ICAM1P05362 532 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZFYP08048 801 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 GNAT1P11488 350 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZSCAN20P17040 1043 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 GNAT2P19087 354 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 SLC1A4P43007 532 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 KIR2DL1P43626 348 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 KIR2DL2P43627 348 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 CPT1AP50416 773 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 ALDH5A1P51649 535 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 WDR5P61964 334 aaKnown RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 SPIRE1Q08AE8 756 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 BFSP2Q13515 415 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 MLC1Q15049 377 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 PTPN21Q16825 1174 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 FIGNQ5HY92 759 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 MROH9Q5TGP6 573 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 BROXQ5VW32 411 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 DEFB128Q7Z7B8 93 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 RASSF3Q86WH2 238 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 TEX2Q8IWB9 1127 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZNF444Q8N0Y2 327 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 KIAA1958Q8N8K9 716 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZNF610Q8N9Z0 462 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 UHMK1Q8TAS1 419 aaKnown RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 AFAP1L1Q8TED9 768 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 JPH3Q8WXH2 748 aaPredicted RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 DLG3Q92796 817 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 TRMT2BQ96GJ1 504 aaKnown RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 WDR11Q9BZH6 1224 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 KCNH6Q9H252 994 aa5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 RANBP17Q9H2T7 1088 aaKnown RBP5.39□□□□□ -1.55
CDC42EP3-202ENST00000422687 UBE2ZQ9H832 354 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms