RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PDXDC1Q6P996 788 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 RSPO2Q6UXX9 243 aaPredicted RBP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 METTL23Q86XA0 190 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 GLYCTKQ8IVS8 523 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 GPR65Q8IYL9 337 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 PDCL2Q8N4E4 241 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 TOP6BLQ8N6T0 577 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 FBXL13Q8NEE6 735 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 PPP2R3CQ969Q6 453 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 MMS19Q96T76 1030 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 CLSTN3Q9BQT9 956 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 TUBGCP2Q9BSJ2 902 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 HSD3B7Q9H2F3 369 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 APOBEC3GQ9HC16 384 aaKnown RBP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 CBX8Q9HC52 389 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 DSEQ9UL01 958 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 L1RE1Q9UN81 338 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 COQ4Q9Y3A0 265 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 BACE2Q9Y5Z0 518 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 KIAA1671Q9BY89 1806 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 ANK1P16157 1881 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 RALGAPA2Q2PPJ7 1873 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 NLRC5Q86WI3 1866 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 BECN2A8MW95 431 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 H7C4K7 107 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 PMM2O15305 246 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 LINC01565O15544 149 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 N4BP1O75113 896 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 ASS1P00966 412 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 ZNF18P17022 549 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 CDK11BP21127 795 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 EEF1GP26641 437 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 OR1D2P34982 312 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 RBM10P98175 930 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 MYL7Q01449 175 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 LRMPQ12912 555 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 MAN2A1Q16706 1144 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 DUSP6Q16828 381 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 VWA3BQ502W6 1294 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 ZNF667Q5HYK9 610 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 WDR44Q5JSH3 913 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 ZNF280DQ6N043 979 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 LLGL2Q6P1M3 1020 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 SCARA5Q6ZMJ2 495 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 DPH6Q7L8W6 267 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 LIMS2Q7Z4I7 341 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 LUZP1Q86V48 1076 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 OSTM1Q86WC4 334 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 PALB2Q86YC2 1186 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 ADGRF2Q8IZF7 708 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 THEM5Q8N1Q8 247 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 CCDC150Q8NCX0 1101 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 TAF4BQ92750 862 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 TATDN2Q93075 761 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 RTP3Q9BQQ7 232 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 MRPL45Q9BRJ2 306 aaKnown RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 IMPG2Q9BZV3 1241 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 SMYD3Q9H7B4 428 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 VRTNQ9H8Y1 702 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 TAB2Q9NYJ8 693 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 FNIP2Q9P278 1114 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 MTRRQ9UBK8 725 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 FBXL5Q9UKA1 691 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-202ENST00000422544 CDY1Q9Y6F8 540 aa9.94□□□□□ -0.82
PDGFC-202ENST00000422544 OR6C75A6NL08 312 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 PES1O00541 588 aaKnown RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 GABRDO14764 452 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 P4HA2O15460 535 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 TGM5O43548 720 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 HCRTO43612 131 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CAVIN2O95810 425 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 ADH1AP07327 375 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 WEE2P0C1S8 567 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 OR4Q2P0C623 313 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 SPATA31D3P0C874 917 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 ATP1A3P13637 1013 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 P4HA1P13674 534 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 EPCAMP16422 314 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 ACAT1P24752 427 aaKnown RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 LMO2P25791 158 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 GNL1P36915 607 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 ASPAP45381 313 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 RAP1GAPP47736 663 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 NDUFV1P49821 464 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CDR1P51861 262 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CDH8P55286 799 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 ZNF445P59923 1031 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 NOP14P78316 857 aaKnown RBP9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CREMQ03060 361 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 CETN1Q12798 172 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 RAB33AQ14088 237 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 KRT31Q15323 416 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 MIIPQ5JXC2 388 aa9.93□□□□□ -0.82
PDGFC-202ENST00000422544 SLC8B1Q6J4K2 584 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms