RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF512Q96ME7 567 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-206ENST00000420121 ASB16Q96NS5 453 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 FOXQ1Q9C009 403 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 ZCWPW1Q9H0M4 648 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 IRF2BPLQ9H1B7 796 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 PCDHA7Q9UN72 937 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF638Q14966 1978 aaKnown RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 FAM186AA6NE01 2351 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 ANAPC1Q9H1A4 1944 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 CYB561D2O14569 222 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF197O14709 1029 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 EXTL3O43909 919 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 DCNP07585 359 aaKnown RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 MYL4P12829 197 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 CASP1P29466 404 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 CDR1P51861 262 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 SNW1Q13573 536 aaKnown RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 ANGPT1Q15389 498 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 MLF2Q15773 248 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 SLC44A4Q53GD3 710 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 PJA1Q8NG27 643 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF507Q8TCN5 953 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 RSPRY1Q96DX4 576 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 C7orf25Q9BPX7 421 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 PYM1Q9BRP8 204 aaKnown RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 TRPV4Q9HBA0 871 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 PDE11AQ9HCR9 933 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF334Q9HCZ1 680 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 RBAKQ9NYW8 714 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 HSFX1Q9UBD0 423 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 SIX4Q9UIU6 781 aa11.92□□□□□ -0.5
SSBP3-206ENST00000420121 MTF2Q9Y483 593 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-206ENST00000420121 TGFB1I1O43294 461 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 ITGB3P05106 788 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 ATF6P18850 670 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 POLR2BP30876 1174 aaKnown RBP11.91□□□□□ -0.5
SSBP3-206ENST00000420121 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
SSBP3-206ENST00000420121 PRKCQQ04759 706 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
SSBP3-206ENST00000420121 TEAD2Q15562 447 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 SLC39A12Q504Y0 691 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 STXBP5Q5T5C0 1151 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 CYP4A22Q5TCH4 519 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 RESP18Q5W5W9 173 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 IQCEQ6IPM2 695 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 VITQ6UXI7 678 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 GAREM2Q75VX8 874 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 ASCL5Q7RTU5 278 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 CBWD2Q8IUF1 395 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 SYCP3Q8IZU3 236 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 GPD1LQ8N335 351 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 ELMOD1Q8N336 334 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 IQUBQ8NA54 791 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 LEMD2Q8NC56 503 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 PSMG2Q969U7 264 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 CHAMP1Q96JM3 812 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 ASAH2Q9NR71 780 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 TMLHEQ9NVH6 421 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 RCOR1Q9UKL0 485 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 DSEQ9UL01 958 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 ZDHHC9Q9Y397 364 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
SSBP3-206ENST00000420121 GVINP1Q7Z2Y8 2422 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 FRYLO94915 3013 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 A0A1W2PRU2 124 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 KANSL1LA0AUZ9 987 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ARNTLO00327 626 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 STK25O00506 426 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 EIF3DO15371 548 aaKnown RBP eCLIP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 POLR2DO15514 142 aaKnown RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 GABBR2O75899 941 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 PDIA4P13667 645 aaKnown RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 CD72P21854 359 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 VIPR2P41587 438 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ASIC1P78348 528 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 PFKPQ01813 784 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 PLD1Q13393 1074 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 FZD5Q13467 585 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 GRM2Q14416 872 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 CCDC142Q17RM4 750 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 SV2CQ496J9 727 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 FAM26FQ5R3K3 315 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ARMCX5Q6P1M9 558 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 UNC13DQ70J99 1090 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 FRMD5Q7Z6J6 570 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 DNAJB7Q7Z6W7 309 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 OSTM1Q86WC4 334 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 MAML2Q8IZL2 1156 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
SSBP3-206ENST00000420121 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms