RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 TCRBV5S1A1TA0A578 114 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ERICH4A6NGS2 130 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 EIF3HO15372 352 aaKnown RBP eCLIP15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 HMGCRP04035 888 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 MMP3P08254 477 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 CXCL8P10145 99 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ADCY2Q08462 1091 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ZNF844Q08AG5 666 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 IFFO1Q0D2I5 559 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 INCA1Q0VD86 236 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 TMEM132DQ14C87 1099 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 TRADDQ15628 312 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ODF2Q5BJF6 829 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 PPP1R15BQ5SWA1 713 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 TTC27Q6P3X3 843 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 DDX42Q86XP3 938 aaKnown RBP eCLIP15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 SPATS2Q86XZ4 545 aaKnown RBP15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 FBXO25Q8TCJ0 367 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 AFG1LQ8WV93 481 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 BRI3BPQ8WY22 251 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 PGM2Q96G03 612 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 SNF8Q96H20 258 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 NCAPGQ9BPX3 1015 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 OSBPL8Q9BZF1 889 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 R3HDMLQ9H3Y0 253 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 NRCAMQ92823 1304 aa15.41■□□□□ 0.06
HLA-DPA1-242ENST00000419277 AXLP30530 894 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 GRM5P41594 1212 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 PLTPP55058 493 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 SNX16P57768 344 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 BYSLQ13895 437 aaKnown RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 GRIK4Q16099 956 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 SEZ6Q53EL9 994 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ZDHHC24Q6UX98 284 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 PASD1Q8IV76 773 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 C1orf127Q8N9H9 656 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 TRAPPC12Q8WVT3 735 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ARL8AQ96BM9 186 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ACAP3Q96P50 834 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 TRAIPQ9BWF2 469 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 DCLK3Q9C098 648 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 A0A087WZ62 844 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 B4GALT5O43286 388 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 KRT7P08729 469 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 RPL21P46778 160 aaKnown RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 RBP5P82980 135 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 KRT17Q04695 432 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ACVR2BQ13705 512 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 SPRYD7Q5W111 196 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 EEF1DP3Q658K8 133 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ADAT2Q7Z6V5 191 aaKnown RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 RELL1Q8IUW5 271 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 NLRP7Q8WX94 980 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 FDXACB1Q9BRP7 624 aaPredicted RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ROPN1BQ9BZX4 212 aaPredicted RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 MINDY3Q9H8M7 445 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ROPN1Q9HAT0 212 aaPredicted RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 ATP8A1Q9Y2Q0 1164 aa15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.4■□□□□ 0.06
HLA-DPA1-242ENST00000419277 PDCD11Q14690 1871 aaKnown RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 SIGLEC16A6NMB1 481 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 GPR25O00155 361 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 CILPO75339 1184 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 VDRP11473 427 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 CD58P19256 250 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 ATP5DP30049 168 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 ADCYAP1R1P41586 468 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 IRAK1P51617 712 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 PTPN11Q06124 597 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 NFX1Q12986 1120 aaKnown RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 ZNF268Q14587 947 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 HADHQ16836 314 aaKnown RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 ZDHHC14Q8IZN3 488 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 TTC13Q8NBP0 860 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 IPO4Q8TEX9 1081 aaKnown RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 GCOM2Q9BZD3 368 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 TRIM31Q9BZY9 425 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 PLEKHA4Q9H4M7 779 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 CHORDC1Q9UHD1 332 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 SIX4Q9UIU6 781 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 BARX2Q9UMQ3 279 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 SNX24Q9Y343 169 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 Q9Y3F1 56 aa15.39■□□□□ 0.05
HLA-DPA1-242ENST00000419277 SMIM35A0A1B0GVV1 85 aa15.38■□□□□ 0.05
HLA-DPA1-242ENST00000419277 A6NJR5 290 aa15.38■□□□□ 0.05
HLA-DPA1-242ENST00000419277 TSPAN1O60635 241 aa15.38■□□□□ 0.05
HLA-DPA1-242ENST00000419277 F2P00734 622 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms