RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 USP1O94782 785 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 PYGMP11217 842 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 BGNP21810 368 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 RNF219Q5W0B1 726 aaPredicted RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 SIKE1Q9BRV8 207 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 APPL1Q9UKG1 709 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 CAB39Q9Y376 341 aaPredicted RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 SNX13Q9Y5W8 968 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 ECE2O60344 883 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 OCM2P0CE71 109 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 OCMP0CE72 109 aaPredicted RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 ZNF235Q14590 738 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 OASLQ15646 514 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 BTN2A2Q8WVV5 523 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 ABHD8Q96I13 439 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 ARHGEF5Q12774 1597 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 RFX7Q2KHR2 1363 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 FAM95CA0A1B0GW59 222 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 LZTS3O60299 673 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 FAM153BP0C7A2 387 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 GRIK1P39086 918 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 NCOA4Q13772 614 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 FAM153CQ494X1 144 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 SEZ6Q53EL9 994 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■□□□□ 9.7
UBR4-205ENST00000417040 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 ETFBP38117 255 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 LRRC8BQ6P9F7 803 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 TMED8Q6PL24 325 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 IPMKQ8NFU5 416 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.57□□□□□ -0.44e-8■■■■■ 36.3
UBR4-205ENST00000417040 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 A0A087X0T9 212 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 FAM228BP0C875 321 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 CASP4P49662 377 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 RCAN1P53805 252 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 PTK2BQ14289 1009 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 BTBD8Q5XKL5 378 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 NLGN1Q8N2Q7 840 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 FBXO36Q8NEA4 188 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 FAM84BQ96KN1 310 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 EPB41L4AQ9HCS5 686 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 NLRP1Q9C000 1473 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 DYTNA2CJ06 578 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 CACNA2D1P54289 1103 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 CSE1LP55060 971 aaKnown RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 PDIA5Q14554 519 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 HDAC7Q8WUI4 952 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 SLC8A2Q9UPR5 921 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 NCF1BA6NI72 391 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 NCF1CA8MVU1 366 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 PRKCBP05771 671 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 GLRBP48167 497 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 ABCE1P61221 599 aaKnown RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 TMEM62Q0P6H9 643 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 KCNT1Q5JUK3 1230 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 PPIL6Q8IXY8 311 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
UBR4-205ENST00000417040 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
UBR4-205ENST00000417040 C3orf70A6NLC5 250 aaPredicted RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 ARIH2O95376 493 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SFNP31947 248 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 TCHHL1Q5QJ38 904 aaPredicted RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 GPAT2Q6NUI2 795 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 MICU2Q8IYU8 434 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 AGBL1Q96MI9 1066 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 KLHL4Q9C0H6 718 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 OSGEPQ9NPF4 335 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 SEPT3Q9UH03 358 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SERPINB9P50453 376 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 PIGHQ14442 188 aaPredicted RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 EPHA7Q15375 998 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 KCTD21Q4G0X4 260 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 C11orf63Q6NUN7 778 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SNX31Q8N9S9 440 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SNX9Q9Y5X1 595 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 RGS5O15539 181 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 ALBP02768 609 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 PON1P27169 355 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 AQP5P55064 265 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 KPNB1Q14974 876 aaKnown RBP12.56□□□□□ -0.4
UBR4-205ENST00000417040 FAM180AQ6UWF9 173 aa12.56□□□□□ -0.4
UBR4-205ENST00000417040 SH3GL1Q99961 368 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms