RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 MYO1EQ12965 1108 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 TUBB2AQ13885 445 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 SLC18A3Q16572 532 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 SGSM1Q2NKQ1 1148 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 ZNF699Q32M78 642 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 SPOPLQ6IQ16 392 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 KCNT2Q6UVM3 1135 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 COLGALT1Q8NBJ5 622 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 TUBB2BQ9BVA1 445 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 COLEC11Q9BWP8 271 aa19.88■□□□□ 0.77
CIRBP-202ENST00000413636 YBX2Q9Y2T7 364 aaKnown RBP19.88■□□□□ 0.77
CIRBP-202ENST00000413636 LINC01553A4QN01 128 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 F8VZ95 297 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 SPTLC1O15269 473 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 ARHGEF15O94989 841 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 ASS1P00966 412 aaKnown RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 CA3P07451 260 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 LINC00271P0C7V0 271 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 ATICP31939 592 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 PNPLA4P41247 253 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 MAGEA1P43355 309 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 LILRA4P59901 499 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 ARID5AQ03989 594 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 DRAP1Q14919 205 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 ZNF569Q5MCW4 686 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 CD300LGQ6UXG3 332 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 PBX4Q9BYU1 374 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 IMPG2Q9BZV3 1241 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 L2HGDHQ9H9P8 463 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 MARCH5Q9NX47 278 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 NUB1Q9Y5A7 615 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 TMEM189-UBE2V1I3L0A0 370 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 ZNF263O14978 683 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 PJA2O43164 708 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 CYP27A1Q02318 531 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 SV2CQ496J9 727 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 WDR44Q5JSH3 913 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 PHLDB3Q6NSJ2 640 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 TMEM173Q86WV6 379 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 BCL7CQ8WUZ0 217 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 TAF4BQ92750 862 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 WDR24Q96S15 920 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 APOBEC3GQ9HC16 384 aaKnown RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 UBE2TQ9NPD8 197 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-202ENST00000413636 AAASQ9NRG9 546 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 GUCA1BQ9UMX6 200 aa19.87■□□□□ 0.77
CIRBP-202ENST00000413636 UQCRHLA0A096LP55 91 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 KPNA7A9QM74 516 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 STAU1O95793 577 aaKnown RBP19.86■□□□□ 0.77
CIRBP-202ENST00000413636 UQCRHP07919 91 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 BRCC3P46736 316 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 NOP14P78316 857 aaKnown RBP19.86■□□□□ 0.77
CIRBP-202ENST00000413636 RAB30Q15771 203 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 WDR72Q3MJ13 1102 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 GJB7Q6PEY0 223 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 TATDN2Q93075 761 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.86■□□□□ 0.77
CIRBP-202ENST00000413636 VRTNQ9H8Y1 702 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 MSRAQ9UJ68 235 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 COLQQ9Y215 455 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-202ENST00000413636 ATP8B3O60423 1300 aa19.86■□□□□ 0.77
CIRBP-202ENST00000413636 I3L4J1 428 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 TADA2AO75478 443 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 MFAP3P55082 362 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 PTK2Q05397 1052 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 GFPT1Q06210 699 aaPredicted RBP19.85■□□□□ 0.77
CIRBP-202ENST00000413636 BMS1Q14692 1282 aaKnown RBP19.85■□□□□ 0.77
CIRBP-202ENST00000413636 ZNF667Q5HYK9 610 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 ENOSF1Q7L5Y1 443 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 SPRED2Q7Z698 418 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 SLC39A11Q8N1S5 342 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 NT5C1BQ96P26 610 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 NKX2-4Q9H2Z4 354 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 NXF1Q9UBU9 619 aaKnown RBP19.85■□□□□ 0.77
CIRBP-202ENST00000413636 ADAM28Q9UKQ2 775 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 POLIQ9UNA4 740 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 PCDHB12Q9Y5F1 795 aa19.85■□□□□ 0.77
CIRBP-202ENST00000413636 A0A0U1RQJ8 604 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 CTAGE9A4FU28 777 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 AARSP49588 968 aaKnown RBP eCLIP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 TIGD5Q53EQ6 642 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 DSTYKQ6XUX3 929 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 RNF10Q8N5U6 811 aaKnown RBP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 ATRIPQ8WXE1 791 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 IGSF21Q96ID5 467 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 IRX2Q9BZI1 471 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 SPG21Q9NZD8 308 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 ADAMTS1Q9UHI8 967 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 AJAP1Q9UKB5 411 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 CARNS1A5YM72 827 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 URI1O94763 535 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 CTNNB1P35222 781 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 BMPR1AP36894 532 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 TNNC1P63316 161 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 ZNF571Q7Z3V5 609 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 ARHGEF19Q8IW93 802 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 SECISBP2LQ93073 1101 aaKnown RBP19.84■□□□□ 0.77
CIRBP-202ENST00000413636 SENP8Q96LD8 212 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms