RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DTWD2Q8NBA8 298 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 OLIG1Q8TAK6 271 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 ASAP3Q8TDY4 903 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 POMGNT1Q8WZA1 660 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 TMEM117Q9H0C3 514 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 TMEM134Q9H6X4 195 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 LIMD1Q9UGP4 676 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 SALL4Q9UJQ4 1053 aa18.35■□□□□ 0.53
PTPRC-206ENST00000413409 GPR179Q6PRD1 2367 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 NRCAMQ92823 1304 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 HIDE1A8MVS5 230 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
PTPRC-206ENST00000413409 GCLMP48507 274 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 CLCN6P51797 869 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 ITIH3Q06033 890 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 STRN3Q13033 797 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 KRT39Q6A163 491 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 TAF2Q6P1X5 1199 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 ALKBH5Q6P6C2 394 aaKnown RBP18.34■□□□□ 0.53
PTPRC-206ENST00000413409 PLPPR4Q7Z2D5 763 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 DEPTORQ8TB45 409 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 PARD3BQ8TEW8 1205 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 BBXQ8WY36 941 aaPredicted RBP18.34■□□□□ 0.53
PTPRC-206ENST00000413409 ZBTB10Q96DT7 871 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 BICD1Q96G01 975 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 AZI2Q9H6S1 392 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 PCDHB12Q9Y5F1 795 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 R4GN57 208 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 USP24Q9UPU5 2620 aa18.34■□□□□ 0.53
PTPRC-206ENST00000413409 NCANO14594 1321 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 LRRIQ3A6PVS8 624 aaPredicted RBP18.33■□□□□ 0.53
PTPRC-206ENST00000413409 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.535e-7■■■■■ 31.5
PTPRC-206ENST00000413409 EXTL3O43909 919 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 MAFO75444 373 aaPredicted RBP18.33■□□□□ 0.53
PTPRC-206ENST00000413409 WEE2P0C1S8 567 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 STAG3L1P0CL83 205 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 ZSCAN20P17040 1043 aaPredicted RBP18.33■□□□□ 0.53
PTPRC-206ENST00000413409 HOXB8P17481 243 aaPredicted RBP18.33■□□□□ 0.53
PTPRC-206ENST00000413409 KLRC1P26715 233 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 LIG4P49917 911 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 SLC26A2P50443 739 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 BRD3Q15059 726 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 ENOX2Q16206 610 aaKnown RBP18.33■□□□□ 0.53
PTPRC-206ENST00000413409 MARCH8Q5T0T0 291 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 PLPP4Q5VZY2 271 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 PHLDB3Q6NSJ2 640 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 DCLK2Q8N568 766 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 ZSWIM2Q8NEG5 633 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 SLC30A5Q8TAD4 765 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 SAAL1Q96ER3 474 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 RAB21Q9UL25 225 aa18.33■□□□□ 0.53
PTPRC-206ENST00000413409 GOLGA8IPA6NC78 632 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 GOLGA8JA6NMD2 632 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 SRGAP2BP0DMP2 458 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 GPC3P51654 580 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 SLFN12LQ6IEE8 588 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 PDE12Q6L8Q7 609 aaKnown RBP18.32■□□□□ 0.52
PTPRC-206ENST00000413409 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 LNX1Q8TBB1 728 aaPredicted RBP18.32■□□□□ 0.52
PTPRC-206ENST00000413409 TMEM143Q96AN5 459 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 FAM81BQ96LP2 452 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 JPH2Q9BR39 696 aaPredicted RBP18.32■□□□□ 0.52
PTPRC-206ENST00000413409 ADAM7Q9H2U9 754 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
PTPRC-206ENST00000413409 CCDC151A5D8V7 595 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 ATP8B1O43520 1251 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 ZC3H11AO75152 810 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPRC-206ENST00000413409 CLDN10P78369 228 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 MRPS6P82932 125 aaKnown RBP18.31■□□□□ 0.52
PTPRC-206ENST00000413409 PSMD6Q15008 389 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 IER5Q5VY09 327 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 ARHGEF19Q8IW93 802 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 ZDHHC14Q8IZN3 488 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 COLGALT1Q8NBJ5 622 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 TCP11Q8WWU5 503 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 OSBPL9Q96SU4 736 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 PACSIN1Q9BY11 444 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 SEMA4AQ9H3S1 761 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 ANKZF1Q9H8Y5 726 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 RNF14Q9UBS8 474 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 PADI3Q9ULW8 664 aa18.31■□□□□ 0.52
PTPRC-206ENST00000413409 IGKV6-21A0A0C4DH24 114 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 MBLAC1A4D2B0 266 aaPredicted RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 LRRIQ4A6NIV6 560 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 CES2O00748 559 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 TMEM253P0C7T8 217 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 PNMA6AP0CW24 399 aaPredicted RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 IBSPP21815 317 aaPredicted RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 EFNA5P52803 228 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 CAPSQ13938 189 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 SPOUT1Q5T280 376 aaKnown RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 CDCA2Q69YH5 1023 aaPredicted RBP18.3■□□□□ 0.52
PTPRC-206ENST00000413409 ENOSF1Q7L5Y1 443 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 RSPH3Q86UC2 560 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 THNSL1Q8IYQ7 743 aa18.3■□□□□ 0.52
PTPRC-206ENST00000413409 FBXL13Q8NEE6 735 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 402.3 ms