RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RAB3IL1Q8TBN0 382 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 GAD1Q99259 594 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 KCNF1Q9H3M0 494 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 SAGE1Q9NXZ1 904 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 DDX56Q9NY93 547 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 FOXN3O00409 490 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 DPYSL4O14531 572 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 RPL9P32969 192 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 RPL10AP62906 217 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 JADE1Q6IE81 842 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 TSHZ1Q6ZSZ6 1077 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 TMEM86AQ8N2M4 240 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CCHCR1Q8TD31 782 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 SLITRK1Q96PX8 696 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 DNAJC7Q99615 494 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 DDX50Q9BQ39 737 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 WNT8AQ9H1J5 351 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 XPNPEP1Q9NQW7 623 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CISHQ9NSE2 258 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 BARX2Q9UMQ3 279 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 COMMD10Q9Y6G5 202 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 FRMD3A2A2Y4 597 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 LRRIQ3A6PVS8 624 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 POMCP01189 267 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TMEM253P0C7T8 217 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 GZMAP12544 262 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 ALDH1A3P47895 512 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 POU5F1Q01860 360 aaKnown RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 PAN2Q504Q3 1202 aaKnown RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 CHP1Q99653 195 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 FAM49BQ9NUQ9 324 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 FAM105AQ9NUU6 356 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TTLL3Q9Y4R7 772 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TGFB1I1O43294 461 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TJP3O95049 919 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 LSM8O95777 96 aaKnown RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 EPHB4P54760 987 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 GALCP54803 685 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 EFHC2Q5JST6 749 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 MORN1Q5T089 497 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 LRRC8DQ7L1W4 858 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 STKLD1Q8NE28 680 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 ATP2A3Q93084 1043 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 GABRQQ9UN88 632 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 PTCH2Q9Y6C5 1203 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 COL11A2P13942 1736 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 CCDC188H7C350 402 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 PALMO75781 387 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 LCP1P13796 627 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 BMP6P22004 513 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 OAS2P29728 719 aaKnown RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 BCAT1P54687 386 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 PRPSAP1Q14558 356 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 GOLGA7BQ2TAP0 167 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 CTXN3Q4LDR2 81 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TAPT1Q6NXT6 567 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 SHQ1Q6PI26 577 aaKnown RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TAOK1Q7L7X3 1001 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 GLIS3Q8NEA6 775 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 UBLCP1Q8WVY7 318 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-211ENST00000413186 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TRIM31Q9BZY9 425 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 GTF2IRD1Q9UHL9 959 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 CASTOR2A6NHX0 329 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 ARVCFO00192 962 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 ENC1O14682 589 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 ADCY6O43306 1168 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 CCL5P13501 91 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 CCL23P55773 120 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 COG7P83436 770 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 ENPEPQ07075 957 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 MCL1Q07820 350 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 MGAT5BQ3V5L5 792 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 HSP90AA5PQ58FG0 334 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 EEF1DP3Q658K8 133 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 OVOS1Q6IE37 1185 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 TMEM176AQ96HP8 235 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 PTPN18Q99952 460 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 SLC8A2Q9UPR5 921 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 MYH6P13533 1939 aa8.99□□□□□ -0.97
SYNE1-211ENST00000413186 DOCK2Q92608 1830 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 KPNA7A9QM74 516 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 F8VZ95 297 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 PAEPP09466 180 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 ADCY8P40145 1251 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 MARSP56192 900 aaKnown RBP8.98□□□□□ -0.97
SYNE1-211ENST00000413186 YWHAHQ04917 246 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-211ENST00000413186 PIGHQ14442 188 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-211ENST00000413186 NOMO2Q5JPE7 1267 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 SLC24A5Q71RS6 500 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 MFSD14AQ96MC6 490 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 GTF3C4Q9UKN8 822 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 USP20Q9Y2K6 914 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 ATP2C2O75185 946 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 KLK7P49862 253 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 GRIK3Q13003 919 aa8.98□□□□□ -0.97
SYNE1-211ENST00000413186 MMS22LQ6ZRQ5 1243 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms