RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 LRRC2Q9BYS8 371 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ABCG4Q9H172 646 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LMBRD1Q9NUN5 540 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 EURLQ9NYK6 297 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 USP15Q9Y4E8 981 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PSAT1Q9Y617 370 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CHURC1-FNTBB4DL54 471 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NARSO43776 548 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 USP1O94782 785 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 KLHL2O95198 593 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SLC34A2O95436 690 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ATP1A1P05023 1023 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 FESP07332 822 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 HPGDP15428 266 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TCEA1P23193 301 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 MAGEA12P43365 314 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CPA2P48052 419 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ACADVLP49748 655 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 HUNKP57058 714 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RPL10AP62906 217 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SCRN1Q12765 414 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 KDELC2Q7Z4H8 507 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ARHGEF25Q86VW2 580 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NELFCDQ8IXH7 590 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RIBC1Q8N443 379 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CHCHD4Q8N4Q1 142 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 OR7G1Q8NGA0 311 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CPVLQ9H3G5 476 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 MRPL47Q9HD33 250 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CENPBD1B2RD01 187 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 PPEF2O14830 753 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 GADD45BO75293 160 aaPredicted RBP4.78□□□□□ -1.65
PTPN13-202ENST00000411767 C6orf183Q5T699 404 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 THEMIS2Q5TEJ8 643 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 TCEAL6Q6IPX3 200 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 PRR5LQ6MZQ0 368 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 STOX1Q6ZVD7 989 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 MMGT1Q8N4V1 131 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 C12orf50Q8NA57 414 aaPredicted RBP4.78□□□□□ -1.65
PTPN13-202ENST00000411767 SRFBP1Q8NEF9 429 aaKnown RBP4.78□□□□□ -1.65
PTPN13-202ENST00000411767 NELFBQ8WX92 580 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 SGCDQ92629 289 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 ESR2Q92731 530 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 SAV1Q9H4B6 383 aaPredicted RBP4.78□□□□□ -1.65
PTPN13-202ENST00000411767 THAP1Q9NVV9 213 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 GTSE1Q9NYZ3 720 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 AHSPQ9NZD4 102 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 STK39Q9UEW8 545 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 ACAD8Q9UKU7 415 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 PCDHGA1Q9Y5H4 931 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 SNX13Q9Y5W8 968 aa4.78□□□□□ -1.65
PTPN13-202ENST00000411767 NPHP3Q7Z494 1330 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SLC16A8O95907 504 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CYP4B1P13584 511 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TMOD1P28289 359 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 IFNGR2P38484 337 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RFC3P40938 356 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ARCN1P48444 511 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TWF1Q12792 350 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF658Q5TYW1 1059 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 WDR49Q8IV35 697 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TCP11L2Q8N4U5 519 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 BEST2Q8NFU1 509 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 EPS8L1Q8TE68 723 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RCN3Q96D15 328 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL15Q96M94 604 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MCCC1Q96RQ3 725 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 EGFL8Q99944 293 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SLC26A6Q9BXS9 759 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 GSDMCQ9BYG8 508 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RSAD1Q9HA92 442 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 POLE4Q9NR33 117 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ALG6Q9Y672 507 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF207O43670 478 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ZBED1O96006 694 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 IFNA4P05014 189 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 PNMA6AP0CW24 399 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 THRBP10828 461 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CYP2C9P11712 490 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ALDH6A1Q02252 535 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL30Q0D2K2 578 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 HIC1Q14526 733 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RAB30Q15771 203 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 LRIF1Q5T3J3 769 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CC2D1AQ6P1N0 951 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 C12orf45Q8N5I9 185 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RBBP8NLQ8NC74 664 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ENGASEQ8NFI3 743 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ING5Q8WYH8 240 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MIPEPQ99797 713 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SHCBP1LQ9BZQ2 653 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SLC13A1Q9BZW2 595 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 VAT1LQ9HCJ6 419 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 VTA1Q9NP79 307 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SRP68Q9UHB9 627 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 POLIQ9UNA4 740 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 IL16Q14005 1332 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 POC1B-GALNT4F8VUJ3 575 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DDX3XO00571 662 aaKnown RBP eCLIP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms