RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRIM58Q8NG06 486 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZPLD1Q8TCW7 415 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 SLC25A28Q96A46 364 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 TEKT5Q96M29 485 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 SLC46A1Q96NT5 459 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 FOXN4Q96NZ1 517 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 BTBD2Q9BX70 525 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 TRIM15Q9C019 465 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 EPB41L1Q9H4G0 881 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 PLEKHA4Q9H4M7 779 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 MYOZ1Q9NP98 299 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 NLRP2Q9NX02 1062 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 GALNT8Q9NY28 637 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 CLEC1BQ9P126 229 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 ARHGAP28Q9P2N2 729 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 PI4KBQ9UBF8 816 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 PEF1Q9UBV8 284 aaKnown RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 EFR3BQ9Y2G0 817 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 APC2O95996 2303 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 MXRA5Q9NR99 2828 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 POLQO75417 2590 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 LOC102724159A0A0B4J2E5 919 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZFAND5O76080 213 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 IGKV1-39P01597 117 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 AMBPP02760 352 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 IGKV1D-39P04432 117 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 WEE2P0C1S8 567 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 MGAT1P26572 445 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 VAV2P52735 878 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 MEF2BQ02080 365 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 FUT7Q11130 342 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 MLECQ14165 292 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 PWP2Q15269 919 aaKnown RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 INO80DQ53TQ3 878 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 RBM20Q5T481 1227 aaKnown RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 MEX3CQ5U5Q3 659 aaKnown RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 KRT79Q5XKE5 535 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 DIEXFQ68CQ4 756 aaKnown RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 GTF2IRD2BQ6EKJ0 949 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 TTLL5Q6EMB2 1281 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 VWA1Q6PCB0 445 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 DEF8Q6ZN54 512 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 Q6ZR54 194 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 GTF2IRD2Q86UP8 949 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 IFNL3Q8IZI9 196 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 ENAHQ8N8S7 591 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF248Q8NDW4 579 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 TRIM63Q969Q1 353 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF428Q96B54 188 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF285Q96NJ3 590 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 SIGLEC11Q96RL6 698 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 SF3B5Q9BWJ5 86 aaKnown RBP-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 FAM117AQ9C073 453 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 INCENPQ9NQS7 918 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 PLSCR3Q9NRY6 295 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 SEPT3Q9UH03 358 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 TIMELESSQ9UNS1 1208 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 MYCBP2O75592 4640 aa-1.03□□□□□ -2.57
RNU4-88P-201ENST00000411220 SEC16AO15027 2179 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CKAP5Q14008 2032 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 ARPC4-TTLL3A0A0A6YYG9 625 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 ERVV-1B6SEH8 477 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 H7BY64 318 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 HNRNPDLO14979 420 aaKnown RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CNOT3O75175 753 aaKnown RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 URI1O94763 535 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 FGF2P09038 288 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 SP9P0CG40 484 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CTSAP10619 480 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 PLS3P13797 630 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CARSP49589 748 aaKnown RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 ERFP50548 548 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CLCN5P51795 746 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 DRG2P55039 364 aaKnown RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 ID2Q02363 134 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 FPGSQ05932 587 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 ST3GAL1Q11201 340 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 PTPRRQ15256 657 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CNGA3Q16281 694 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 TXNRD1Q16881 649 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 DPY19L1Q2PZI1 675 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 ANO6Q4KMQ2 910 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 SPATA8Q6RVD6 105 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 TICAM1Q8IUC6 712 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 RBM12BQ8IXT5 1001 aaKnown RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 CCDC144CPQ8IYA2 1237 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 COLGALT2Q8IYK4 626 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 LYPD1Q8N2G4 141 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 PLA2G15Q8NCC3 412 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 OR56A1Q8NGH5 318 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 OIT3Q8WWZ8 545 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 SLC6A18Q96N87 628 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 NEU1Q99519 415 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 SLC25A33Q9BSK2 321 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 C10orf95Q9H7T3 257 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 GORASP2Q9H8Y8 452 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 GOPCQ9HD26 462 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 MYOZ2Q9NPC6 264 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 Q9UF83 564 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 NEU3Q9UQ49 428 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms