RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, human

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA1-205	ENST00000409542	CXCL12	P48061	93 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CCR3	P51677	355 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SIM2	Q14190	667 aa	Predicted RBP	13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TEAD2	Q15562	447 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZNF174	Q15697	407 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CTXN3	Q4LDR2	81 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RNF19B	Q6ZMZ0	732 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PRR23C	Q6ZRP0	262 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542		Q6ZS52	159 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	NETO1	Q8TDF5	533 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	KCND1	Q9NSA2	647 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PCDHB6	Q9Y5E3	794 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PDCD11	Q14690	1871 aa	Known RBP	13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	USP24	Q9UPU5	2620 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542		K7ERI5	159 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ABLIM1	O14639	778 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZNF263	O14978	683 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SYN3	O14994	580 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	EFNA5	P52803	228 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	EPHA5	P54756	1037 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MYL5	Q02045	173 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PTGDR	Q13258	359 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PNOC	Q13519	176 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PPP2R5A	Q15172	486 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CYP4A22	Q5TCH4	519 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	HEATR6	Q6AI08	1181 aa	Known RBP	13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TXNDC11	Q6PKC3	985 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MFSD6L	Q8IWD5	586 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TRIML1	Q8N9V2	468 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CCDC150	Q8NCX0	1101 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TTC8	Q8TAM2	541 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SHKBP1	Q8TBC3	707 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZBTB45	Q96K62	511 aa	Predicted RBP	13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	IFT74	Q96LB3	600 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZNF512	Q96ME7	567 aa	Predicted RBP	13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	LRRC3B	Q96PB8	259 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TARS2	Q9BW92	718 aa	Known RBP	13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	LRRC3	Q9BY71	257 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	BHMT2	Q9H2M3	363 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CRISPLD1	Q9H336	500 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TRPV4	Q9HBA0	871 aa		13.79	□□□□□ -0.2
CHRNA1-205	ENST00000409542		H7C4K7	107 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CBFA2T2	O43439	604 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	OR4Q2	P0C623	313 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	KCNE1	P15382	129 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SEZ6	Q53EL9	994 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	STXBP5	Q5T5C0	1151 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TPGS2	Q68CL5	300 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	DAW1	Q8N136	415 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	DEPDC1B	Q8WUY9	529 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	DDX12P	Q92771	950 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SUSD3	Q96L08	255 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	IER2	Q9BTL4	223 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CCDC94	Q9BW85	323 aa	Predicted RBP	13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	AFF4	Q9UHB7	1163 aa	Known RBP	13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PCDHA5	Q9Y5H7	936 aa		13.78	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SDK1	Q7Z5N4	2213 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	SLC38A8	A6NNN8	435 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	LRP3	O75074	770 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	OR52Z1	P0C646	297 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	NPTX2	P47972	431 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	TRAPPC10	P48553	1259 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	YARS	P54577	528 aa	Known RBP	13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	PEX3	P56589	373 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CCZ1B	P86790	482 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CCZ1	P86791	482 aa	Predicted RBP	13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	PPP2R5D	Q14738	602 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	POSTN	Q15063	836 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CSRP2	Q16527	193 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	ZNF568	Q3ZCX4	644 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	IQCE	Q6IPM2	695 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	TMC8	Q8IU68	726 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	SPEM1	Q8N4L4	309 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	KIFAP3	Q92845	792 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	ACAP3	Q96P50	834 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	XPO4	Q9C0E2	1151 aa	Known RBP	13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	HSD3B7	Q9H2F3	369 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	RXFP3	Q9NSD7	469 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	IFNK	Q9P0W0	207 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CNTN3	Q9P232	1028 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	DACH1	Q9UI36	760 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	RALY	Q9UKM9	306 aa	Known RBP	13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	NUB1	Q9Y5A7	615 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CIT	O14578	2027 aa		13.77	□□□□□ -0.21
CHRNA1-205	ENST00000409542		A0A1W2PRU2	124 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CCDC169	A6NNP5	214 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	ACTN4	O43707	911 aa	Known RBP	13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	SMC2	O95347	1197 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	HARS	P12081	509 aa	Known RBP	13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	PROZ	P22891	400 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	FANCC	Q00597	558 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	GRIN1	Q05586	938 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CCDC6	Q16204	474 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	SLC10A6	Q3KNW5	377 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	ELMOD1	Q8N336	334 aa		13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	FAM160A2	Q8N612	972 aa	Predicted RBP	13.76	□□□□□ -0.21
CHRNA1-205	ENST00000409542	C4orf32	Q8N8J7	132 aa		13.76	□□□□□ -0.21

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