RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 ADPGKQ9BRR6 497 aa4.24□□□□□ -1.73
LRRTM4-201ENST00000409088 XYLT2Q9H1B5 865 aa4.24□□□□□ -1.73
LRRTM4-201ENST00000409088 LIMD1Q9UGP4 676 aa4.24□□□□□ -1.73
LRRTM4-201ENST00000409088 DOCK3Q8IZD9 2030 aa4.24□□□□□ -1.73
LRRTM4-201ENST00000409088 RRN3P2A6NIE6 340 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 H3BQF6 201 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC188H7C350 402 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TNPO2O14787 897 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TSPAN1O60635 241 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GJB6O95452 261 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MYL3P08590 195 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF865P0CJ78 1059 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SMIM10L2AP0DMW4 78 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SMIM10L2BP0DMW5 78 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PYGMP11217 842 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CYP2C9P11712 490 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SMCPP49901 116 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PEX5P50542 639 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 FAM193AP78312 1265 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CENPCQ03188 943 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ORC1Q13415 861 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 HLTFQ14527 1009 aaKnown RBP eCLIP4.23□□□□□ -1.735e-8■■■■■ 29.6
LRRTM4-201ENST00000409088 SLC10A6Q3KNW5 377 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SEL1L2Q5TEA6 688 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 C17orf99Q6UX52 265 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MMS22LQ6ZRQ5 1243 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CATSPER4Q7RTX7 472 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 DDX42Q86XP3 938 aaKnown RBP eCLIP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MSL3Q8N5Y2 521 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 AENQ8WTP8 325 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CASKIN2Q8WXE0 1202 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 KAT2BQ92831 832 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ACAP3Q96P50 834 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 NAP1L3Q99457 506 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 OSMRQ99650 979 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 C1QTNF2Q9BXJ5 285 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CELF4Q9BZC1 486 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 AP5M1Q9H0R1 490 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 WNT8AQ9H1J5 351 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CNTN6Q9UQ52 1028 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GNEQ9Y223 722 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PLXNB2O15031 1838 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CENPFP49454 3210 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GOLGA6L10A0A0M3HER8 536 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 A0A1B0GUA9 196 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MEFVO15553 781 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TTI1O43156 1089 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 HOXD8P13378 290 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SSR1P43307 286 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF132P52740 706 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 EPHB4P54760 987 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GYS2P54840 703 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 LACTBP83111 547 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF200P98182 395 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 HSP90B2PQ58FF3 399 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 DAB2IPQ5VWQ8 1189 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TRIM72Q6ZMU5 477 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MON1BQ7L1V2 547 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MAATS1Q7Z4T9 603 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF410Q86VK4 478 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 UBR7Q8N806 425 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC26Q8TAB7 109 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 DNAJB3Q8WWF6 145 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TRIM11Q96F44 468 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GCOM2Q9BZD3 368 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TRIM31Q9BZY9 425 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ACBD3Q9H3P7 528 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ZFYVE28Q9HCC9 887 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ERVK-5Q9HDB9 667 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 AVENQ9NQS1 362 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GDF3Q9NR23 364 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 RNF19AQ9NV58 838 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SIX4Q9UIU6 781 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TTC7AQ9ULT0 858 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 AGAP1Q9UPQ3 857 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 USTQ9Y2C2 406 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MAP4K5Q9Y4K4 846 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PCDHA3Q9Y5H8 950 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PLXNA1Q9UIW2 1896 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MROH7Q68CQ1 1323 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 NRCAMQ92823 1304 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC66A2RUB6 948 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TREHO43280 583 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 NPTXRO95502 500 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 F2P00734 622 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 FAM153BP0C7A2 387 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 MYBL1P10243 752 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 POLR2BP30876 1174 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 RGS2P41220 211 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ASPAP45381 313 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 RWDD2BP57060 319 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PAK2Q13177 524 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM132DQ14C87 1099 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 FAM153CQ494X1 144 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 RUFY4Q6ZNE9 571 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 DPH6Q7L8W6 267 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM35BQ8NCS4 154 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 C1orf131Q8NDD1 294 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 RIN2Q8WYP3 895 aaPredicted RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TFAP2BQ92481 460 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms