RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 A8MXQ7 604 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 ACKR2O00590 384 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
ATG9A-203ENST00000409033 LCP1P13796 627 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 ITGA8P53708 1063 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 IFT88Q13099 833 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 PPP2R5DQ14738 602 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 GRIK4Q16099 956 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 P3H1Q32P28 736 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 BBS9Q3SYG4 887 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 OTUD6BQ8N6M0 293 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 PRMT7Q9NVM4 692 aaPredicted RBP13.25□□□□□ -0.29
ATG9A-203ENST00000409033 CAND2O75155 1236 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 ARSEP51690 589 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 NOL9Q5SY16 702 aaKnown RBP13.25□□□□□ -0.29
ATG9A-203ENST00000409033 PPP1R21Q6ZMI0 780 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 WDR49Q8IV35 697 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 NETO2Q8NC67 525 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 RRP15Q9Y3B9 282 aaKnown RBP13.25□□□□□ -0.29
ATG9A-203ENST00000409033 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
ATG9A-203ENST00000409033 CALB1P05937 261 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 HSPA6P17066 643 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
ATG9A-203ENST00000409033 ITIH3Q06033 890 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 MYO1EQ12965 1108 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 C11orf63Q6NUN7 778 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 MFSD7Q6UXD7 560 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 TMEM121Q9BTD3 319 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 HMGXB4Q9UGU5 601 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 GGT7Q9UJ14 662 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 ABCD1P33897 745 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 NOMO3P69849 1222 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 LRRC31Q6UY01 552 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 USP50Q70EL3 339 aaPredicted RBP13.24□□□□□ -0.29
ATG9A-203ENST00000409033 CTAGE3PQ8IX95 158 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 SRRM1Q8IYB3 904 aaKnown RBP13.24□□□□□ -0.29
ATG9A-203ENST00000409033 TFAP2BQ92481 460 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 IP6K2Q9UHH9 426 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 PODXLO00592 558 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 ATP2A1O14983 1001 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 MED7O43513 233 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 MSCO60682 206 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 PROSCO94903 275 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 STBD1O95210 358 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 GJA5P36382 358 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 CDH6P55285 790 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 ZNF200P98182 395 aaPredicted RBP13.24□□□□□ -0.29
ATG9A-203ENST00000409033 DHX34Q14147 1143 aaKnown RBP13.24□□□□□ -0.29
ATG9A-203ENST00000409033 SURF1Q15526 300 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 FAXCQ5TGI0 409 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 CABS1Q96KC9 395 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 LPIN3Q9BQK8 851 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 CCDC77Q9BR77 488 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 SLC5A4Q9NY91 659 aa13.24□□□□□ -0.29
ATG9A-203ENST00000409033 CST8O60676 142 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 MAMLD1Q13495 774 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 ZPBP2Q6X784 338 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 TMC3Q7Z5M5 1100 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 GOLGA2P5Q9HBQ8 144 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 ADAMTS5Q9UNA0 930 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 PDGFRAP16234 1089 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 GCLCP48506 637 aaPredicted RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 DGKDQ16760 1214 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 PLEKHH3Q7Z736 793 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 CCDC13Q8IYE1 715 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 DPP3Q9NY33 737 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 FEZ2Q9UHY8 353 aaPredicted RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 DIS3Q9Y2L1 958 aaKnown RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 PCDHA3Q9Y5H8 950 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 IKBKGQ9Y6K9 419 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 FAM187AA6NFU0 413 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 ICAM3P32942 547 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 GTF2A2P52657 109 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 NDST1P52848 882 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 ZNF844Q08AG5 666 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 DARS2Q6PI48 645 aaKnown RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 MAIP1Q8WWC4 291 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 GCOM2Q9BZD3 368 aaPredicted RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
ATG9A-203ENST00000409033 TIMM13Q9Y5L4 95 aaPredicted RBP13.23□□□□□ -0.29
ATG9A-203ENST00000409033 WDR91A4D1P6 747 aa13.22□□□□□ -0.29
ATG9A-203ENST00000409033 BTNL10A8MVZ5 291 aa13.22□□□□□ -0.29
ATG9A-203ENST00000409033 HMGB1P1B2RPK0 211 aaPredicted RBP13.22□□□□□ -0.29
ATG9A-203ENST00000409033 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
ATG9A-203ENST00000409033 ASS1P00966 412 aaKnown RBP13.22□□□□□ -0.29
ATG9A-203ENST00000409033 ACVR2BQ13705 512 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms