RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 PDCD11Q14690 1871 aaKnown RBP13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 NCANO14594 1321 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 OR4Q2P0C623 313 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 ODC1P11926 461 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 PLS3P13797 630 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 MCM2P49736 904 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 GUCY1B3Q02153 619 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 SF3A2Q15428 464 aaKnown RBP13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 C1orf186Q6ZWK4 172 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 GAREM2Q75VX8 874 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 BICD1Q96G01 975 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 ZFYVE19Q96K21 471 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 ZC3H10Q96K80 434 aaKnown RBP13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 LSM14BQ9BX40 385 aaKnown RBP13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 SLC27A5Q9Y2P5 690 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 TIMM13Q9Y5L4 95 aaPredicted RBP13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 FAM208BQ5VWN6 2430 aa13.34□□□□□ -0.27
APOBEC3B-204ENST00000407298 SPAG17Q6Q759 2223 aa13.33□□□□□ -0.27
APOBEC3B-204ENST00000407298 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 TTC26A0AVF1 554 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 MTMR11A4FU01 709 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 E9PMD0 336 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 LAD1O00515 517 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 VNN2O95498 520 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 CXCL8P10145 99 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 SCP2P22307 547 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 SMARCB1Q12824 385 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 RABEP1Q15276 862 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 ZBTB6Q15916 424 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 STXBP5Q5T5C0 1151 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 CD302Q8IX05 232 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 C4orf32Q8N8J7 132 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 ATAD1Q8NBU5 361 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 TMEM161BQ8NDZ6 487 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 LRRC3BQ96PB8 259 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 RUSC1Q9BVN2 902 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 CRISPLD1Q9H336 500 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 DSEQ9UL01 958 aa13.33□□□□□ -0.28
APOBEC3B-204ENST00000407298 ZFHX4Q86UP3 3567 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 SFI1A8K8P3 1242 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 TRDMT1O14717 391 aaKnown RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 MEFVO15553 781 aaPredicted RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 EXTL3O43909 919 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 KCNK5O95279 499 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 MAPTP10636 758 aaKnown RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 DDX6P26196 483 aaKnown RBP eCLIP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 LILRA4P59901 499 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 TNK2Q07912 1038 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 MAPK7Q13164 816 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 RUNX3Q13761 415 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 ELF2Q15723 593 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 FBXO43Q4G163 708 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 ZSCAN31Q96LW9 406 aaPredicted RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 SH2B1Q9NRF2 756 aaPredicted RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 GKN1Q9NS71 199 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 LAMA1P25391 3075 aa13.32□□□□□ -0.28
APOBEC3B-204ENST00000407298 SOBPA7XYQ1 873 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 LACTBL1A8MY62 500 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 PROS1P07225 676 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 DRD1P21728 446 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 AVPR1AP37288 418 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 MPLP40238 635 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 PRPHP41219 470 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 LIG4P49917 911 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 HMGN5P82970 282 aaKnown RBP13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 SPAG1Q07617 926 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 BFSP1Q12934 665 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 CCDC6Q16204 474 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 RNF43Q68DV7 783 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 CC2D1AQ6P1N0 951 aaPredicted RBP13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 CMTM8Q8IZV2 173 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 THEM5Q8N1Q8 247 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 CCDC26Q8TAB7 109 aa13.31□□□□□ -0.28
APOBEC3B-204ENST00000407298 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms