RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 DPP3Q9NY33 737 aa30.8■■■□□ 2.52
CSNK1E-205ENST00000405675 SNTG2Q9NY99 539 aa30.8■■■□□ 2.52
CSNK1E-205ENST00000405675 HMGXB4Q9UGU5 601 aa30.8■■■□□ 2.52
CSNK1E-205ENST00000405675 C2CD2Q9Y426 696 aa30.8■■■□□ 2.52
CSNK1E-205ENST00000405675 BHMG1C9JSJ3 638 aaPredicted RBP30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 GNAT1P11488 350 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 EPHB4P54760 987 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 CDC42EP1Q00587 391 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 DAB2IPQ5VWQ8 1189 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 HPDLQ96IR7 371 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 TWNKQ96RR1 684 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 NAP1L3Q99457 506 aaPredicted RBP30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 CELF4Q9BZC1 486 aaKnown RBP30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 VIPAS39Q9H9C1 493 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 TRIP12Q14669 1992 aaPredicted RBP30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 MYO1FO00160 1098 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 LSM8O95777 96 aaKnown RBP30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 INHAP05111 366 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 RAD23BP54727 409 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 CCSAPQ6IQ19 270 aaPredicted RBP30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 UBE2Q2Q8WVN8 375 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 KIF12Q96FN5 646 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 VRTNQ9H8Y1 702 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 PCDHGC3Q9UN70 934 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 HES2Q9Y543 173 aa30.79■■■□□ 2.52
CSNK1E-205ENST00000405675 ATICP31939 592 aa30.78■■■□□ 2.52
CSNK1E-205ENST00000405675 ARHGEF6Q15052 776 aa30.78■■■□□ 2.52
CSNK1E-205ENST00000405675 DENND1BQ6P3S1 775 aa30.78■■■□□ 2.52
CSNK1E-205ENST00000405675 SLC27A1Q6PCB7 646 aa30.78■■■□□ 2.52
CSNK1E-205ENST00000405675 TCRBV7S2A1N4TA0A589 114 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 TTI1O43156 1089 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 FAM153BP0C7A2 387 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 RWDD2BP57060 319 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 FAM153CQ494X1 144 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 SEL1L2Q5TEA6 688 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 ELOVL4Q9GZR5 314 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 FAM153AQ9UHL3 310 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 GTF2IRD1Q9UHL9 959 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 PROSCO94903 275 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 CD19P15391 556 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 PPP1R2P3Q6NXS1 205 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 EMBQ6PCB8 327 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 TMEM35BQ8NCS4 154 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 ZMAT2Q96NC0 199 aaKnown RBP30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 ITGA11Q9UKX5 1188 aa30.77■■■□□ 2.52
CSNK1E-205ENST00000405675 SCN10AQ9Y5Y9 1956 aa30.76■■■□□ 2.52
CSNK1E-205ENST00000405675 EIF4BP23588 611 aaKnown RBP30.76■■■□□ 2.52
CSNK1E-205ENST00000405675 CDH5P33151 784 aaPredicted RBP30.76■■■□□ 2.52
CSNK1E-205ENST00000405675 PAK2Q13177 524 aa30.76■■■□□ 2.52
CSNK1E-205ENST00000405675 SNX17Q15036 470 aa30.76■■■□□ 2.52
CSNK1E-205ENST00000405675 MRPL47Q9HD33 250 aaKnown RBP30.76■■■□□ 2.52
CSNK1E-205ENST00000405675 POLR3GO15318 223 aaPredicted RBP30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 CST5P28325 142 aaPredicted RBP30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 RBP5P82980 135 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 FAM47CQ5HY64 1035 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 GDF6Q6KF10 455 aaPredicted RBP30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 NOTUMQ6P988 496 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 DDX42Q86XP3 938 aaKnown RBP eCLIP30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 SLC4A11Q8NBS3 891 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 CAVIN3Q969G5 261 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 FAXDC2Q96IV6 333 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 TRIM17Q9Y577 477 aa30.76■■■□□ 2.51
CSNK1E-205ENST00000405675 DNAH12Q6ZR08 3092 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 CITO14578 2027 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 CILPO75339 1184 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 SLC1A1P43005 524 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 SLC13A5Q86YT5 568 aaPredicted RBP30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 PRELID2Q8N945 189 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 SLAIN1Q8ND83 568 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 CCDC26Q8TAB7 109 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 SNX27Q96L92 541 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 PARVAQ9NVD7 372 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 PTCH2Q9Y6C5 1203 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 SCINQ9Y6U3 715 aa30.75■■■□□ 2.51
CSNK1E-205ENST00000405675 GOLGA6L10A0A0M3HER8 536 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 TCRBV5S1A1TA0A578 114 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 TLR3O15455 904 aaKnown RBP30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 ECHS1P30084 290 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 GRK4P32298 578 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 RPL7AP62424 266 aaKnown RBP30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 CLUL1Q15846 466 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 NT5DC4Q86YG4 428 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 FEZF2Q8TBJ5 459 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 NXF3Q9H4D5 531 aaKnown RBP30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 RNF19AQ9NV58 838 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 O00370 1275 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 PAEPP09466 180 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 SMYD5Q6GMV2 418 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 CD302Q8IX05 232 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 TSEN2Q8NCE0 465 aaKnown RBP30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 ZNF518BQ9C0D4 1074 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 CYP3A43Q9HB55 503 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 CYTH4Q9UIA0 394 aa30.74■■■□□ 2.51
CSNK1E-205ENST00000405675 CALB1P05937 261 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 LLGL1Q15334 1064 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 MAATS1Q7Z4T9 603 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 TRIM51Q9BSJ1 452 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 PLEKHA5Q9HAU0 1116 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 GRIN2DO15399 1336 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 PPEF2O14830 753 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms