RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 SNX30Q5VWJ9 437 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 COLGALT2Q8IYK4 626 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SHCBP1LQ9BZQ2 653 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 POLR3FQ9H1D9 316 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SENP2Q9HC62 589 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 ING3Q9NXR8 418 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 IMPACTQ9P2X3 320 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 FKTNO75072 461 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 CACTIN-AS1Q8N1I8 211 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 MB21D1Q8N884 522 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 OR8K1Q8NGG5 319 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 PIGUQ9H490 435 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 EML4Q9HC35 981 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 RBM7Q9Y580 266 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 CTIFO43310 598 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SEMA3DO95025 777 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 HLA-DQA2P01906 255 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 ATP6V1B1P15313 513 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SP100P23497 879 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 RBL2Q08999 1139 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 DSG4Q86SJ6 1040 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 MSL3Q8N5Y2 521 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 RABGGTAQ92696 567 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 GCNT4Q9P109 453 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 EFCAB6Q5THR3 1501 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 CIAO1O76071 339 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 LRPAP1P30533 357 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 NDUFV1P49821 464 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 ALCAMQ13740 583 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SPARCL1Q14515 664 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 TMEM199Q8N511 208 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 MRPS31Q92665 395 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 OLFM3Q96PB7 478 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 OXCT2Q9BYC2 517 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 APPL1Q9UKG1 709 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 CCDC163A0A0D9SF12 145 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 HNRNPRO43390 633 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 CYP2C9P11712 490 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 NR1D1P20393 614 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 ADSLP30566 484 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 AP1S2P56377 157 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SLC13A5Q86YT5 568 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 SLC25A41Q8N5S1 370 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 ZSCAN18Q8TBC5 510 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 NUP85Q9BW27 656 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 GID8Q9NWU2 228 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 RNF14Q9UBS8 474 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 JRKLQ9Y4A0 524 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 USP6P35125 1406 aa11.62□□□□□ -0.55
CACNA1C-217ENST00000399641 MYL4P12829 197 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 CYLC2Q14093 348 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 TBATAQ96M53 351 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 KLHL11Q9NVR0 708 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 ANAPC2Q9UJX6 822 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 F8W810 466 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 DYRK3O43781 588 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 FAM107AO95990 144 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 BRAFP15056 766 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 SOX6P35712 828 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 SERPINH1P50454 418 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 SLC9A2Q9UBY0 812 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 XPO7Q9UIA9 1087 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 HERC5Q9UII4 1024 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 RWDD2AQ9UIY3 292 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 PCDHA13Q9Y5I0 950 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 OPLAHO14841 1288 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 ERVK-10P10266 1014 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 PRELPP51888 382 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 TCEA2Q15560 299 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 PREPLQ4J6C6 727 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 NOL9Q5SY16 702 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 TTC23Q5W5X9 447 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 OTOAQ7RTW8 1153 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 SFR1Q86XK3 245 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 HPS6Q86YV9 775 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 LCORLQ8N3X6 602 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 DPP10Q8N608 796 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 MOSPD2Q8NHP6 518 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 NFU1Q9UMS0 254 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 HEG1Q9ULI3 1381 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 M0QYV0 167 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 CASP14P31944 242 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 SFNP31947 248 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 PLCL1Q15111 1095 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 RNF44Q7L0R7 432 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 TGS1Q96RS0 853 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 NOL6Q9H6R4 1146 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 STAT5BP51692 787 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 MAPK10P53779 464 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 BTG3Q14201 252 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 CLMNQ96JQ2 1002 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 AGAP3Q96P47 875 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 QKIQ96PU8 341 aaKnown RBP eCLIP11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 TMCC3Q9ULS5 477 aa11.61□□□□□ -0.55
CACNA1C-217ENST00000399641 NCKAP1Q9Y2A7 1128 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms