RNA–Protein interactions for RNA: ENST00000398849.6

AC005562.1-202, humanhuman

TSL 2

Gene AC005562.1, Length 1,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005562.1-202ENST00000398849 B3GAT3O94766 335 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 MICAL2O94851 1124 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 PDGFBP01127 241 aaPredicted RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 CYP3A5P20815 502 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 PAX3P23760 479 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 CDC25AP30304 524 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 LONP1P36776 959 aaKnown RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 CLCNKBP51801 687 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 YARSP54577 528 aaKnown RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SOX4Q06945 474 aaPredicted RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ZNF211Q13398 564 aaPredicted RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 HTR4Q13639 388 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ZBTB6Q15916 424 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SLC10A6Q3KNW5 377 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ZNF568Q3ZCX4 644 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ARSHQ5FYA8 562 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 PRSS55Q6UWB4 352 aaPredicted RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 PALB2Q86YC2 1186 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ALDH16A1Q8IZ83 802 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SLC44A3Q8N4M1 653 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 C3orf58Q8NDZ4 430 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ZNF461Q8TAF7 563 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ACAP3Q96P50 834 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 FIZ1Q96SL8 496 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 RTP3Q9BQQ7 232 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 UPF2Q9HAU5 1272 aaKnown RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 BLOC1S4Q9NUP1 217 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 CACNG4Q9UBN1 327 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 GDAQ9Y2T3 454 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 TTC26A0AVF1 554 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ADAM12O43184 909 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 C8AP07357 584 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 PLA2G4BP0C869 781 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SP100P23497 879 aaPredicted RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 TXLNAP40222 546 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 NBL1P41271 181 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 GLRA4Q5JXX5 417 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 LIN9Q5TKA1 542 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 NPAS3Q8IXF0 933 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 BEST2Q8NFU1 509 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 PHACTR1Q9C0D0 580 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SMOC2Q9H3U7 446 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 EGFL7Q9UHF1 273 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 CDH7Q9ULB5 785 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 SMC3Q9UQE7 1217 aa9.39□□□□□ -0.91
AC005562.1-202ENST00000398849 COL4A2P08572 1712 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 PATJQ8NI35 1801 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 LOC100996750A0A140TA64 210 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 VWA3AA6NCI4 1184 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 H3BQV1 296 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 M0QZQ0 153 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 PODXLO00592 558 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 SLC16A4O15374 487 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 XYLBO75191 536 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 CLTAP09496 248 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 ATF2P15336 505 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 IGFBP6P24592 240 aaPredicted RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 OR1D2P34982 312 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 GTF2BQ00403 316 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 STRN3Q13033 797 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 PTPAQ15257 358 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 PPM1LQ5SGD2 360 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 LARP1BQ659C4 914 aaKnown RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 TPGS2Q68CL5 300 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 RSPO2Q6UXX9 243 aaPredicted RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 CD302Q8IX05 232 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 CCDC105Q8IYK2 499 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 TCEAL8Q8IYN2 117 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 LRRC15Q8TF66 581 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 HASPINQ8TF76 798 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 RABGGTAQ92696 567 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 DDX23Q9BUQ8 820 aaKnown RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 KRTAP4-6Q9BYQ5 205 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 SAP130Q9H0E3 1048 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 POLD4Q9HCU8 107 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 TIMMDC1Q9NPL8 285 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 STYXL1Q9Y6J8 313 aa9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 DNMT3AQ9Y6K1 912 aaPredicted RBP9.38□□□□□ -0.91
AC005562.1-202ENST00000398849 NUP210Q8TEM1 1887 aaPredicted RBP9.37□□□□□ -0.91
AC005562.1-202ENST00000398849 TCHHQ07283 1943 aa9.37□□□□□ -0.91
AC005562.1-202ENST00000398849 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
AC005562.1-202ENST00000398849 H7C4K7 107 aa9.37□□□□□ -0.91
AC005562.1-202ENST00000398849 CLDN3O15551 220 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms