RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PYM1Q9BRP8 204 aaKnown RBP14.48□□□□□ -0.09
VCX3A-202ENST00000398729 CBWD1Q9BRT8 395 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 PCIF1Q9H4Z3 704 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 YIPF1Q9Y548 306 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 TCHHQ07283 1943 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 GOLGA8IPA6NC78 632 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 GOLGA8JA6NMD2 632 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 KPNA7A9QM74 516 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 CYB561D2O14569 222 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 EIF3DO15371 548 aaKnown RBP eCLIP14.47□□□□□ -0.09
VCX3A-202ENST00000398729 MICAL2O94851 1124 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 CEBPBP17676 345 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 ALDH1A3P47895 512 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 WNT7BP56706 349 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 DUSP4Q13115 394 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 PUM1Q14671 1186 aaKnown RBP eCLIP14.47□□□□□ -0.09
VCX3A-202ENST00000398729 PRSS36Q5K4E3 855 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 FAM26FQ5R3K3 315 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 RESP18Q5W5W9 173 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 THEM5Q8N1Q8 247 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 GPD1LQ8N335 351 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 GLIS3Q8NEA6 775 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 HPS3Q969F9 1004 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 KXD1Q9BQD3 176 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 FOXQ1Q9C009 403 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 ARHGEF3Q9NR81 526 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 CEP72Q9P209 647 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 RCOR1Q9UKL0 485 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 TSC2P49815 1807 aa14.47□□□□□ -0.09
VCX3A-202ENST00000398729 MTMR11A4FU01 709 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 VNN2O95498 520 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 MYL4P12829 197 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 EPHB3P54753 998 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 GPC5P78333 572 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 CENPPQ6IPU0 288 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 UNC13DQ70J99 1090 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 HS6ST3Q8IZP7 471 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 RUBCNQ92622 972 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 TCEAL4Q96EI5 215 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 BORCS6Q96GS4 357 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 TMEM209Q96SK2 561 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 ASAH2Q9NR71 780 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 HSFX1Q9UBD0 423 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 AGAP1Q9UPQ3 857 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 ZFHX4Q86UP3 3567 aa14.46□□□□□ -0.09
VCX3A-202ENST00000398729 CHD6Q8TD26 2715 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 ZNF233A6NK53 670 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 ECI2O75521 394 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 ITGB3P05106 788 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 TMEM191BP0C7N4 346 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 POLR2BP30876 1174 aaKnown RBP14.45□□□□□ -0.1
VCX3A-202ENST00000398729 CCR2P41597 374 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 AFMP43652 599 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 EPHA5P54756 1037 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 STARD6P59095 220 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 PFKPQ01813 784 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 SURF1Q15526 300 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 WSCD1Q658N2 575 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 EPM2AIP1Q7L775 607 aaPredicted RBP14.45□□□□□ -0.1
VCX3A-202ENST00000398729 CEP57L1Q8IYX8 460 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 C1orf127Q8N9H9 656 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 OR10T2Q8NGX3 314 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 ZNF507Q8TCN5 953 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 SHDQ96IW2 340 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 ZCWPW1Q9H0M4 648 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 BLZF1Q9H2G9 400 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 CRISPLD1Q9H336 500 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 KIAA1586Q9HCI6 787 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 PDE11AQ9HCR9 933 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 SLC27A5Q9Y2P5 690 aa14.45□□□□□ -0.1
VCX3A-202ENST00000398729 R3HCC1Q9Y3T6 440 aaKnown RBP14.45□□□□□ -0.1
VCX3A-202ENST00000398729 MTF2Q9Y483 593 aaPredicted RBP14.45□□□□□ -0.1
VCX3A-202ENST00000398729 UBE4BO95155 1302 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.44□□□□□ -0.1
VCX3A-202ENST00000398729 PVALEFA0A1B0GWK0 134 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 KRT19P08727 400 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 CASP1P29466 404 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 HOXD13P35453 343 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 TUFMP49411 452 aaKnown RBP14.44□□□□□ -0.1
VCX3A-202ENST00000398729 KRT85P78386 507 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 RBP5P82980 135 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 SMARCB1Q12824 385 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 SLC39A12Q504Y0 691 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 LRRC52Q8N7C0 313 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 PJA1Q8NG27 643 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 C2orf15Q8WU43 125 aaKnown RBP14.44□□□□□ -0.1
VCX3A-202ENST00000398729 ELSPBP1Q96BH3 223 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 ANKRD36BP1Q96IX9 119 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 MTMR12Q9C0I1 747 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 GPR88Q9GZN0 384 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 DNAJC25Q9H1X3 360 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 ZFP14Q9HCL3 533 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 HSPBP1Q9NZL4 362 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 ASB3Q9Y575 518 aa14.44□□□□□ -0.1
VCX3A-202ENST00000398729 HUS1O60921 280 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 KRT37O76014 449 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms