RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CYP27A1Q02318 531 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 LRRC52Q8N7C0 313 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 GOLGA2P5Q9HBQ8 144 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 ADAMTS1Q9UHI8 967 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 RALGAPA2Q2PPJ7 1873 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 WEE2P0C1S8 567 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 P4HA1P13674 534 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 EN2P19622 333 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 GFPT1Q06210 699 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 TMEM270Q6UE05 265 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 VPS36Q86VN1 386 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 RNF14Q9UBS8 474 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 MACROD2A1Z1Q3 448 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 PIRO00625 290 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 CD58P19256 250 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 ANXA13P27216 316 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 TCTN1Q2MV58 587 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 DEFB128Q7Z7B8 93 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 SLC47A2Q86VL8 602 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 UBR7Q8N806 425 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 BCO2Q9BYV7 579 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 ACP6Q9NPH0 428 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 CISHQ9NSE2 258 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 HYOU1Q9Y4L1 999 aa20.61■□□□□ 0.89
PDLIM2-204ENST00000397760 SRGAP2O75044 1071 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 LRPAP1P30533 357 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 YWHAEP62258 255 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 TNNC1P63316 161 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 SLC18A3Q16572 532 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 CREG2Q8IUH2 290 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 TFR2Q9UP52 801 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 CNTN6Q9UQ52 1028 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 INPP5FQ9Y2H2 1132 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 DUSP10Q9Y6W6 482 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 KIAA0100Q14667 2235 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 A0A087X0T9 212 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 POMCP01189 267 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 FAM228BP0C875 321 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 CYP11B1P15538 503 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 MAGEA1P43355 309 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 NAB2Q15742 525 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 NOP9Q86U38 636 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 RBBP8NLQ8NC74 664 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 EPS8L1Q8TE68 723 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 SLC20A1Q8WUM9 679 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 AGPAT1Q99943 283 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 SYT11Q9BT88 431 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 SMYD3Q9H7B4 428 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 CYP3A43Q9HB55 503 aa20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 PRDM5Q9NQX1 630 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-204ENST00000397760 ERICH4A6NGS2 130 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 TNFAIP3P21580 790 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 PNPLA4P41247 253 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 RAP1GAPP47736 663 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 PDE6CP51160 858 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 CDH8P55286 799 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 BPIFB4P59827 614 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 GLB1LQ6UWU2 654 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 CCNI2Q6ZMN8 369 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 COG1Q8WTW3 980 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 ZNF560Q96MR9 790 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 SDCBP2Q9H190 292 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 ELAC1Q9H777 363 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 TMEM161AQ9NX61 479 aa20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-204ENST00000397760 TRIM43BA6NCK2 446 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 DDX3XO00571 662 aaKnown RBP eCLIP20.58■□□□□ 0.899e-11■■■■■ 33.8
PDLIM2-204ENST00000397760 UBE2Q1Q7Z7E8 422 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 GLYCTKQ8IVS8 523 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 OLIG1Q8TAK6 271 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 LNX1Q8TBB1 728 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 TRIM43Q96BQ3 446 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 CAPZA3Q96KX2 299 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 NOX5Q96PH1 765 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 NOCTQ9UK39 431 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 SNX9Q9Y5X1 595 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 CAPN6Q9Y6Q1 641 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 TRIP11Q15643 1979 aa20.58■□□□□ 0.89
PDLIM2-204ENST00000397760 INPPL1O15357 1258 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 TIMP1P01033 207 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 CALCAP01258 141 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 FGFR1P11362 822 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 RFC2P35250 354 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 TAF6P49848 677 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 GRIK3Q13003 919 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 SMYD5Q6GMV2 418 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 SLC30A5Q8TAD4 765 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 SEPT11Q9NVA2 429 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 VPS18Q9P253 973 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 PCDHB7Q9Y5E2 793 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 KPNA7A9QM74 516 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 PDE2AO00408 941 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 KIAA0355O15063 1070 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 ZNF132P52740 706 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 SV2CQ496J9 727 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 ZNF394Q53GI3 561 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 GLE1Q53GS7 698 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 CLLU1OSQ5K130 101 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 OSBPL9Q96SU4 736 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms