RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SMARCB1Q12824 385 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 MYO1EQ12965 1108 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 PLD1Q13393 1074 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 TDGQ13569 410 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 KCNB1Q14721 858 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 PSMD6Q15008 389 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 WSCD1Q658N2 575 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 IQCEQ6IPM2 695 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 RBM43Q6ZSC3 357 aaKnown RBP15.67■□□□□ 0.1
SEC13-208ENST00000397109 SLC9A9Q8IVB4 645 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 TMEM174Q8WUU8 243 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 MFSD14AQ96MC6 490 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 KCNK12Q9HB15 430 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 GDAP2Q9NXN4 497 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 CDH7Q9ULB5 785 aa15.67■□□□□ 0.1
SEC13-208ENST00000397109 PDXKO00764 312 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 ZNF197O14709 1029 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 HUS1O60921 280 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 RHOP08100 348 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 TNNI1P19237 187 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 BFSP1Q12934 665 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 TMEM86AQ8N2M4 240 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 CXorf38Q8TB03 319 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 SPATA18Q8TC71 538 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 ZNF512Q96ME7 567 aaPredicted RBP15.66■□□□□ 0.1
SEC13-208ENST00000397109 KCTD10Q9H3F6 313 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 HCFC1R1Q9NWW0 138 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 HSFX1Q9UBD0 423 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 SIX4Q9UIU6 781 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 MRPS23Q9Y3D9 190 aaKnown RBP15.66■□□□□ 0.1
SEC13-208ENST00000397109 TRIOO75962 3097 aa15.66■□□□□ 0.1
SEC13-208ENST00000397109 OR4Q2P0C623 313 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 DLATP10515 647 aaKnown RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 TWF1Q12792 350 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 DUSP4Q13115 394 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 LMBRD2Q68DH5 695 aaPredicted RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 CENPPQ6IPU0 288 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 HFE2Q6ZVN8 426 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 LEMD2Q8NC56 503 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 OR5B17Q8NGF7 314 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 FGF13Q92913 245 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 PBXIP1Q96AQ6 731 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 PGLYRP2Q96PD5 576 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 CGRRF1Q99675 332 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 ZCWPW1Q9H0M4 648 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 DMAC2Q9NW81 257 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 HOOK1Q9UJC3 728 aaKnown RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 HCN4Q9Y3Q4 1203 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 NOTCH4Q99466 2003 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 CALUO43852 315 aaPredicted RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 MICAL2O94851 1124 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 ALDH1A3P47895 512 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 TUFMP49411 452 aaKnown RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 EPHB3P54753 998 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 CYP4A22Q5TCH4 519 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 DPH6Q7L8W6 267 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 TRAPPC11Q7Z392 1133 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 DCP1BQ8IZD4 617 aaKnown RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 TOP6BLQ8N6T0 577 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 OR10T2Q8NGX3 314 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 SPATA20Q8TB22 786 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 ITFG1Q8TB96 612 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 C2orf15Q8WU43 125 aaKnown RBP15.65■□□□□ 0.1
SEC13-208ENST00000397109 CCDC127Q96BQ5 260 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 ASIC4Q96FT7 647 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 CORO1BQ9BR76 489 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 GDE1Q9NZC3 331 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 YIPF1Q9Y548 306 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 ASB3Q9Y575 518 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 SNX9Q9Y5X1 595 aa15.65■□□□□ 0.1
SEC13-208ENST00000397109 ZDBF2Q9HCK1 2354 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 PTPRJQ12913 1337 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 ANHXE9PGG2 379 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 VNN2O95498 520 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 LHX1P48742 406 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 AP3M2P53677 418 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 MYL7Q01449 175 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 TSPY1Q01534 308 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 SLC39A12Q504Y0 691 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 MTSS1LQ765P7 747 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 PDZD4Q76G19 769 aaPredicted RBP15.64■□□□□ 0.09
SEC13-208ENST00000397109 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
SEC13-208ENST00000397109 PDCL2Q8N4E4 241 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 ATAD1Q8NBU5 361 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 SPPL2BQ8TCT7 592 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 HPDLQ96IR7 371 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 TMEM209Q96SK2 561 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 RTP3Q9BQQ7 232 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 FUCA2Q9BTY2 467 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 RMND1Q9NWS8 449 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 L1RE1Q9UN81 338 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 DUSP12Q9UNI6 340 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 TRAF3IP3Q9Y228 551 aa15.64■□□□□ 0.09
SEC13-208ENST00000397109 TSC2P49815 1807 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 NR3C1P04150 777 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 CCDC173Q0VFZ6 552 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms