RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 SLC8B1Q6J4K2 584 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 THEM5Q8N1Q8 247 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 KBTBD7Q8WVZ9 684 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 NT5C1BQ96P26 610 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 KLHL5Q96PQ7 755 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 MMS19Q96T76 1030 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 VPS16Q9H269 839 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 POLIQ9UNA4 740 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 TIMM13Q9Y5L4 95 aaPredicted RBP17.59■□□□□ 0.41
AP1S3-202ENST00000396653 TRANK1O15050 2925 aa17.58■□□□□ 0.41
AP1S3-202ENST00000396653 TEX28O15482 410 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 LRRN2O75325 713 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 CSPG5O95196 566 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 CNPP09543 421 aaKnown RBP17.58■□□□□ 0.4
AP1S3-202ENST00000396653 FOSL2P15408 326 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 IGFBP4P22692 258 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 TBXAS1P24557 533 aaPredicted RBP17.58■□□□□ 0.4
AP1S3-202ENST00000396653 CA8P35219 290 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 FKBP15Q5T1M5 1219 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 SMYD5Q6GMV2 418 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 ADGRD2Q7Z7M1 963 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 PPFIBP1Q86W92 1011 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 TTC39CQ8N584 583 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 FAM81BQ96LP2 452 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 CLSTN3Q9BQT9 956 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 INTS2Q9H0H0 1204 aaKnown RBP17.58■□□□□ 0.4
AP1S3-202ENST00000396653 SMYD3Q9H7B4 428 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 FBXL5Q9UKA1 691 aa17.58■□□□□ 0.4
AP1S3-202ENST00000396653 CDH23Q9H251 3354 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 PES1O00541 588 aaKnown RBP17.57■□□□□ 0.4
AP1S3-202ENST00000396653 PCSK1P29120 753 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 GCNT1Q02742 428 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 INCA1Q0VD86 236 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 CUL2Q13617 745 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 RAB33AQ14088 237 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 TCEAL5Q5H9L2 206 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 TRIM65Q6PJ69 517 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 SCARA5Q6ZMJ2 495 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 OSTM1Q86WC4 334 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 RTP3Q9BQQ7 232 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 ACBD6Q9BR61 282 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 MRPL45Q9BRJ2 306 aaKnown RBP17.57■□□□□ 0.4
AP1S3-202ENST00000396653 TLE6Q9H808 572 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 DDX43Q9NXZ2 648 aaKnown RBP17.57■□□□□ 0.4
AP1S3-202ENST00000396653 CDY1Q9Y6F8 540 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 PTPRDP23468 1912 aa17.57■□□□□ 0.4
AP1S3-202ENST00000396653 NCK2O43639 380 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
AP1S3-202ENST00000396653 PON1P27169 355 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 YWHAEP62258 255 aaKnown RBP17.56■□□□□ 0.4
AP1S3-202ENST00000396653 FILIP1LQ4L180 1135 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 RSPO2Q6UXX9 243 aaPredicted RBP17.56■□□□□ 0.4
AP1S3-202ENST00000396653 UNC93AQ86WB7 457 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 OR10T2Q8NGX3 314 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 TATDN2Q93075 761 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 ELMO3Q96BJ8 720 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 CRACR2AQ9BSW2 395 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 SDCBP2Q9H190 292 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
AP1S3-202ENST00000396653 A0A1B0GTH6 734 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 RPL17P18621 184 aaKnown RBP17.55■□□□□ 0.4
AP1S3-202ENST00000396653 KLRC2P26717 231 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 OR1D2P34982 312 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 NRIP1P48552 1158 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 CLCN4P51793 760 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 TSPY1Q01534 308 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 ROR1Q01973 937 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 KCNMA1Q12791 1236 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 HYAL1Q12794 435 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 SMARCB1Q12824 385 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 COL19A1Q14993 1142 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 INTS6LQ5JSJ4 861 aaKnown RBP17.55■□□□□ 0.4
AP1S3-202ENST00000396653 TPGS2Q68CL5 300 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 ENOSF1Q7L5Y1 443 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 EFHBQ8N7U6 833 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 OR6B3Q8NGW1 331 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 JAKMIP2Q96AA8 810 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 ERGIC2Q96RQ1 377 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 ZCWPW1Q9H0M4 648 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
AP1S3-202ENST00000396653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.55■□□□□ 0.4
AP1S3-202ENST00000396653 APEX2Q9UBZ4 518 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 CDH9Q9ULB4 789 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 MAFFQ9ULX9 164 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 BARX2Q9UMQ3 279 aaPredicted RBP17.55■□□□□ 0.4
AP1S3-202ENST00000396653 DAAM1Q9Y4D1 1078 aa17.55■□□□□ 0.4
AP1S3-202ENST00000396653 ADAM12O43184 909 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 CILPO75339 1184 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 GLUD1P00367 558 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 SERPINC1P01008 464 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 CPB1P15086 417 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 SLC9A1P19634 815 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 RFX1P22670 979 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 GNL1P36915 607 aaPredicted RBP17.54■□□□□ 0.4
AP1S3-202ENST00000396653 RAP1GAPP47736 663 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 CDH8P55286 799 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 FANCCQ00597 558 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms