RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 GPR32O75388 356 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 PSEN2P49810 448 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 LLGL1Q15334 1064 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 DNAJC24Q6P3W2 148 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 APBB1IPQ7Z5R6 666 aaPredicted RBP12.89□□□□□ -0.35
ITGB1-202ENST00000396033 CXorf38Q8TB03 319 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 HPDLQ96IR7 371 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 AP5M1Q9H0R1 490 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 FAM114A2Q9NRY5 505 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 ITGA11Q9UKX5 1188 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 RRP15Q9Y3B9 282 aaKnown RBP12.89□□□□□ -0.35
ITGB1-202ENST00000396033 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 FAM187AA6NFU0 413 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 MED7O43513 233 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 SSR1P43307 286 aaKnown RBP12.88□□□□□ -0.35
ITGB1-202ENST00000396033 BEX3Q00994 111 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 ALS2CLQ60I27 953 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 ZDHHC14Q8IZN3 488 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 MREGQ8N565 214 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 FAXDC2Q96IV6 333 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
ITGB1-202ENST00000396033 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
ITGB1-202ENST00000396033 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 SEC14L1Q92503 715 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 ZFYVE28Q9HCC9 887 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 HMGXB4Q9UGU5 601 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 MBLAC1A4D2B0 266 aaPredicted RBP12.88□□□□□ -0.35
ITGB1-202ENST00000396033 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 SLC10A3P09131 477 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 PAEPP09466 180 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
ITGB1-202ENST00000396033 GJC1P36383 396 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 RAD23BP54727 409 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 CFAP58Q5T655 872 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 DENND1BQ6P3S1 775 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 CCDC137Q6PK04 289 aaKnown RBP12.88□□□□□ -0.35
ITGB1-202ENST00000396033 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 IP6K2Q9UHH9 426 aa12.88□□□□□ -0.35
ITGB1-202ENST00000396033 RARAP10276 462 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 HOXA11P31270 313 aaPredicted RBP12.87□□□□□ -0.35
ITGB1-202ENST00000396033 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
ITGB1-202ENST00000396033 RBP5P82980 135 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 NOTUMQ6P988 496 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 CD302Q8IX05 232 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 RHOT1Q8IXI2 618 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 WDTC1Q8N5D0 677 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
ITGB1-202ENST00000396033 MCEEQ96PE7 176 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 ERP44Q9BS26 406 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 CITO14578 2027 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 PCNTO95613 3336 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 CILPO75339 1184 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 HIC1Q14526 733 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 DCUN1D2Q6PH85 259 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 ZIM3Q96PE6 472 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 TWNKQ96RR1 684 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
ITGB1-202ENST00000396033 PCYOX1Q9UHG3 505 aa12.87□□□□□ -0.35
ITGB1-202ENST00000396033 O00370 1275 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 DARSP14868 501 aaKnown RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 MAN1A1P33908 653 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 HSPA9P38646 679 aaKnown RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 TAS2R40P59535 323 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 SIX1Q15475 284 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 CYP1B1Q16678 543 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 SLC4A11Q8NBS3 891 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 OPA1O60313 960 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 PTGIRP43119 386 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 LRRC45Q96CN5 670 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 RUNDC3BQ96NL0 473 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 HAS3O00219 553 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 FSCN2O14926 492 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 TREHO43280 583 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 YARSP54577 528 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms