RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 DCAF4Q8WV16 495 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 SUSD6Q92537 303 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 TRMT13Q9NUP7 481 aaKnown RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 GEMIN8Q9NWZ8 242 aaKnown RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 PI4KBQ9UBF8 816 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 MYOTQ9UBF9 498 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 PTPN13Q12923 2485 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 MROH5Q6ZUA9 1318 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 MAPK8IP3Q9UPT6 1336 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 IGSF10Q6WRI0 2623 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 PIEZO2Q9H5I5 2752 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ANKRD17O75179 2603 aaKnown RBP6.44□□□□□ -1.38
AP3S1-202ENST00000395548 C5orf67F2Z3F1 127 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 K7ESM1 405 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 PRC1O43663 620 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 TBC1D4O60343 1298 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 LRP3O75074 770 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 CDC45O75419 566 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 SNAI1O95863 264 aaPredicted RBP6.44□□□□□ -1.38
AP3S1-202ENST00000395548 AMHP03971 560 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 SRGAP2BP0DMP2 458 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 FGFR1P11362 822 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 PRDX5P30044 214 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 COPB2P35606 906 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 AMPD3Q01432 767 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 BIRC2Q13490 618 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ZNF528Q3MIS6 628 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 BORAQ6PGQ7 559 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 DBX2Q6ZNG2 339 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 C1orf210Q8IVY1 113 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 MAGEB6Q8N7X4 407 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 AFAP1L1Q8TED9 768 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ATRIPQ8WXE1 791 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
AP3S1-202ENST00000395548 CLIC6Q96NY7 704 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 CEP89Q96ST8 783 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 YME1L1Q96TA2 773 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ZFYVE21Q9BQ24 234 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 PHF20Q9BVI0 1012 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 KIAA1683Q9H0B3 1180 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 DHX36Q9H2U1 1008 aaKnown RBP6.44□□□□□ -1.38
AP3S1-202ENST00000395548 RPAP3Q9H6T3 665 aaPredicted RBP6.44□□□□□ -1.38
AP3S1-202ENST00000395548 SLC6A20Q9NP91 592 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 TYW1Q9NV66 732 aaKnown RBP6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ZBTB21Q9ULJ3 1066 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 NUB1Q9Y5A7 615 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 PCDHGA2Q9Y5H1 932 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
AP3S1-202ENST00000395548 ATAD5Q96QE3 1844 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 IGF2RP11717 2491 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 PI4KAP2A4QPH2 592 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 MROH6A6NGR9 719 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 CHL1O00533 1208 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 DDX3XO00571 662 aaKnown RBP eCLIP6.43□□□□□ -1.382e-14■■■■■ 31.8
AP3S1-202ENST00000395548 CTAGE5O15320 804 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 PRODHO43272 600 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 CENPBP07199 599 aaPredicted RBP6.43□□□□□ -1.38
AP3S1-202ENST00000395548 IFIT1P09914 478 aaKnown RBP6.43□□□□□ -1.38
AP3S1-202ENST00000395548 TGM1P22735 817 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 CTNNB1P35222 781 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 MCAMP43121 646 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 EFEMP1Q12805 493 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 PRR31Q5SQ13 230 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 TEPPQ6URK8 271 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 NSMFQ6X4W1 530 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 DZIP1Q86YF9 867 aaKnown RBP6.43□□□□□ -1.38
AP3S1-202ENST00000395548 LGI4Q8N135 537 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 PI4KAP1Q8N8J0 262 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 CAGE1Q8TC20 777 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 TMEM209Q96SK2 561 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 JAM3Q9BX67 310 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 HECTD1Q9ULT8 2610 aa6.43□□□□□ -1.38
AP3S1-202ENST00000395548 TRAV20A0A0B4J274 112 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 CXCL10P02778 98 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 MMP1P03956 469 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 PABPC1P11940 636 aaKnown RBP6.42□□□□□ -1.38
AP3S1-202ENST00000395548 BTDP43251 543 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 PSMC6P62333 389 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 TNFAIP2Q03169 654 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 ADAM9Q13443 819 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 KIZQ2M2Z5 673 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 ODR4Q5SWX8 454 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 ATF7IPQ6VMQ6 1270 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 TLK2Q86UE8 772 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 FOXP4Q8IVH2 680 aaPredicted RBP6.42□□□□□ -1.38
AP3S1-202ENST00000395548 MYOCDQ8IZQ8 938 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 TXNDC5Q8NBS9 432 aaKnown RBP6.42□□□□□ -1.38
AP3S1-202ENST00000395548 SPATA18Q8TC71 538 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 LCORQ96JN0 433 aaPredicted RBP6.42□□□□□ -1.38
AP3S1-202ENST00000395548 NEK1Q96PY6 1258 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 PCGF6Q9BYE7 350 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 EPC1Q9H2F5 836 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 ARHGEF4Q9NR80 690 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 RXFP3Q9NSD7 469 aa6.42□□□□□ -1.38
AP3S1-202ENST00000395548 GNL3LQ9NVN8 582 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms