RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 RBBP8NLQ8NC74 664 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 OR10H5Q8NGA6 315 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 OR6S1Q8NH40 331 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 URGCPQ8TCY9 931 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 KCNG4Q8TDN1 519 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 GRK7Q8WTQ7 553 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CUL5Q93034 780 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 RAB7BQ96AH8 199 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SLC22A18Q96BI1 424 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SIKE1Q9BRV8 207 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 RSRP1Q9BUV0 290 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 STN1Q9H668 368 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 SNX15Q9NRS6 342 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 GRIN2AQ12879 1464 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 HEATR9A2RTY3 570 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 PLD2O14939 933 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ENO2P09104 434 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 BCRP11274 1271 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 JUPP14923 745 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ZFXP17010 805 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 ACAT1P24752 427 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 PITPNBP48739 271 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CASP6P55212 293 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SPAG1Q07617 926 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ITGA7Q13683 1181 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 BLMHQ13867 455 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CTXN3Q4LDR2 81 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SNX30Q5VWJ9 437 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 NEPROQ6NW34 567 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TRAT1Q6PIZ9 186 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 LSRQ86X29 649 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 PALB2Q86YC2 1186 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 FAM133AQ8N9E0 248 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TMEM102Q8N9M5 508 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 FBXO18Q8NFZ0 1043 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TSPEARQ8WU66 669 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TRIM63Q969Q1 353 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ACSF2Q96CM8 615 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 ZSCAN31Q96LW9 406 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 SMC6Q96SB8 1091 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TRIM62Q9BVG3 475 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ZMAT3Q9HA38 289 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 MRM3Q9HC36 420 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 NMRK2Q9NPI5 230 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SNTG1Q9NSN8 517 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ZBTB40Q9NUA8 1239 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 DDX25Q9UHL0 483 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 PCDHGA5Q9Y5G8 931 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 PCDHGA1Q9Y5H4 931 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CEP170Q5SW79 1584 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 TMEM247A6NEH6 219 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 TLL1O43897 1013 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 HRGP04196 525 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 HOXB1P14653 301 aaPredicted RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 EIF3EP60228 445 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 TRAP1Q12931 704 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 NNTQ13423 1086 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 FAM209BQ5JX69 171 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 WDR93Q6P2C0 686 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 PAPD4Q6PIY7 484 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 SYT10Q6XYQ8 523 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SIAH1Q8IUQ4 282 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 HSPH1Q92598 858 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 EXT2Q93063 718 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 PHF12Q96QT6 1004 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 UHRF1Q96T88 793 aaPredicted RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 TTC1Q99614 292 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ST6GALNAC4Q9H4F1 302 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ATAD3AQ9NVI7 634 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 EVA1BQ9NVM1 165 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GDAP2Q9NXN4 497 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 EMC3Q9P0I2 261 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 TLK1Q9UKI8 766 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 MAGEB16A2A368 324 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 H0YIV9 168 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 PEX1O43933 1283 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GCNT3O95395 438 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ANXA6P08133 673 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ANXA8P13928 327 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 IDO1P14902 403 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 LAG3P18627 525 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 CFL1P23528 166 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 GPC1P35052 558 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 KRT2P35908 639 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ITGA8P53708 1063 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SLC8A3P57103 927 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 MAP3K12Q12852 859 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 VEPH1Q14D04 833 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GRIK5Q16478 980 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ANXA8L1Q5VT79 327 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SLFN11Q7Z7L1 901 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 EFHD2Q96C19 240 aaPredicted RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 GRAMD1AQ96CP6 724 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 NLRP4Q96MN2 994 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 HNRNPABQ99729 332 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 NUP85Q9BW27 656 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ATP13A3Q9H7F0 1226 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 CNTD2Q9H8S5 307 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ANGPTL2Q9UKU9 493 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms