RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ZBED6P86452 979 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CDK17Q00537 523 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 APBA1Q02410 837 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CREMQ03060 361 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 DSC1Q08554 894 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 NAB2Q15742 525 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 MEA1Q16626 185 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 DUSP6Q16828 381 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CTC1Q2NKJ3 1217 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 USP41Q3LFD5 358 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 JADE1Q6IE81 842 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
HERC4-203ENST00000395185 PDXDC1Q6P996 788 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 LIMS2Q7Z4I7 341 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 LRRC8AQ8IWT6 810 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 DRC7Q8IY82 874 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 GPR65Q8IYL9 337 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 SPC24Q8NBT2 197 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 OR8K1Q8NGG5 319 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CACTINQ8WUQ7 758 aaKnown RBP9.1□□□□□ -0.95
HERC4-203ENST00000395185 JAKMIP2Q96AA8 810 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 FAM84AQ96KN4 292 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 FNBP1Q96RU3 617 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 STK33Q9BYT3 514 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
HERC4-203ENST00000395185 MMRN2Q9H8L6 949 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.1□□□□□ -0.95
HERC4-203ENST00000395185 AIPL1Q9NZN9 384 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CEP72Q9P209 647 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CD207Q9UJ71 328 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 CNTN6Q9UQ52 1028 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 ARIH1Q9Y4X5 557 aaPredicted RBP9.1□□□□□ -0.95
HERC4-203ENST00000395185 IRAK3Q9Y616 596 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 TTC3P53804 2025 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 COL4A6Q14031 1691 aa9.1□□□□□ -0.95
HERC4-203ENST00000395185 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 C2orf71A6NGG8 1288 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 AKR1B15C9JRZ8 316 aaPredicted RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 H3BQ06 376 aaPredicted RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 PIRO00625 290 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 MFAP3LO75121 409 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 B3GAT3O94766 335 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 HLA-DRAP01903 254 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 SOD2P04179 222 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 RFX1P22670 979 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 LRPAP1P30533 357 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 CASP14P31944 242 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 MYL7Q01449 175 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 CETN1Q12798 172 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 COL19A1Q14993 1142 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 CES5AQ6NT32 575 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 WDR59Q6PJI9 974 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 TMEM184AQ6ZMB5 413 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 IRF2BP2Q7Z5L9 587 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 ADGRD2Q7Z7M1 963 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 UBR7Q8N806 425 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 C1orf127Q8N9H9 656 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 ADAMTS19Q8TE59 1207 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 TAF4BQ92750 862 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 KREMEN1Q96MU8 473 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 PPP1R10Q96QC0 940 aaKnown RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 UHRF1Q96T88 793 aaPredicted RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 LSM14BQ9BX40 385 aaKnown RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 GPR88Q9GZN0 384 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 KCNF1Q9H3M0 494 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 APOBEC3GQ9HC16 384 aaKnown RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 FAM207AQ9NSI2 230 aaPredicted RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 GCNT4Q9P109 453 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 AJAP1Q9UKB5 411 aaPredicted RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 ADAM28Q9UKQ2 775 aa9.09□□□□□ -0.95
HERC4-203ENST00000395185 LUC7L2Q9Y383 392 aaKnown RBP9.09□□□□□ -0.95
HERC4-203ENST00000395185 SF3B1O75533 1304 aaKnown RBP eCLIP9.08□□□□□ -0.96
HERC4-203ENST00000395185 CASTOR2A6NHX0 329 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 HIDE1A8MVS5 230 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 GOLGA6L6A8MZA4 724 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 C2CD2LO14523 706 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 CLASP2O75122 1294 aaKnown RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 ADH1AP07327 375 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 FAM163BP0C2L3 166 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 TRIM21P19474 475 aaKnown RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 ACO1P21399 889 aaKnown RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 PAX3P23760 479 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 ATICP31939 592 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 KRT9P35527 623 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 GLUD2P49448 558 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 KCNQ1P51787 676 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 ADKP55263 362 aaKnown RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 MYL6P60660 151 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 CCZ1BP86790 482 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 TFAMQ00059 246 aaKnown RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 GCNT1Q02742 428 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 SMAD4Q13485 552 aaKnown RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 NCOA4Q13772 614 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 TMEM132DQ14C87 1099 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 SGSM1Q2NKQ1 1148 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
HERC4-203ENST00000395185 E4F1Q66K89 784 aaPredicted RBP9.08□□□□□ -0.96
HERC4-203ENST00000395185 LMBRD2Q68DH5 695 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms