RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ITPRIPL2Q3MIP1 535 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 TCEAL6Q6IPX3 200 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 RINT1Q6NUQ1 792 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 C1orf186Q6ZWK4 172 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 KCNK18Q7Z418 384 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 TCEAL3Q969E4 200 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 DRC1Q96MC2 740 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 LPIN3Q9BQK8 851 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 LSM14BQ9BX40 385 aaKnown RBP17.22■□□□□ 0.35
SNCA-205ENST00000394991 OXCT2Q9BYC2 517 aaPredicted RBP17.22■□□□□ 0.35
SNCA-205ENST00000394991 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 IL21Q9HBE4 155 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 THADAQ6YHU6 1953 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 ZZEF1O43149 2961 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 TTC26A0AVF1 554 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 PP2D1A8MPX8 630 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 CCDC192P0DO97 292 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 WEE1P30291 646 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 MCM2P49736 904 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 ANAPC15P60006 121 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 MCL1Q07820 350 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 MYBPC2Q14324 1141 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 SAFBQ15424 915 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNCA-205ENST00000394991 ARHGAP15Q53QZ3 475 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 TMEM196Q5HYL7 178 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 OVOS1Q6IE37 1185 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 USP37Q86T82 979 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 HPS4Q9NQG7 708 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 PCDHGA5Q9Y5G8 931 aa17.21■□□□□ 0.35
SNCA-205ENST00000394991 OTOL1A6NHN0 477 aaPredicted RBP17.2■□□□□ 0.34
SNCA-205ENST00000394991 AKAP3O75969 853 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 MAPTP10636 758 aaKnown RBP17.2■□□□□ 0.34
SNCA-205ENST00000394991 ATF6P18850 670 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 TYMPP19971 482 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 TNFSF9P41273 254 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 CDR1P51861 262 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 PLK5Q496M5 336 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 PSAPL1Q6NUJ1 521 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 TMEM161BQ8NDZ6 487 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 OR10T2Q8NGX3 314 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 ZC3H10Q96K80 434 aaKnown RBP17.2■□□□□ 0.34
SNCA-205ENST00000394991 NTPCRQ9BSD7 190 aaKnown RBP17.2■□□□□ 0.34
SNCA-205ENST00000394991 C17orf75Q9HAS0 396 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 PLEKHA5Q9HAU0 1116 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 GKN1Q9NS71 199 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 UBQLN1Q9UMX0 589 aaKnown RBP17.2■□□□□ 0.34
SNCA-205ENST00000394991 SLC8A2Q9UPR5 921 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 DNM3Q9UQ16 869 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 PKD1L2Q7Z442 2459 aa17.2■□□□□ 0.34
SNCA-205ENST00000394991 PTPRDP23468 1912 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 C1QTNF9BB2RNN3 333 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 FGF19O95750 216 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 C1QTNF9P0C862 333 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 CYP3A5P20815 502 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 STRN3Q13033 797 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 RNF43Q68DV7 783 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 TRIM68Q6AZZ1 485 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 ITIH5Q86UX2 942 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 RIN3Q8TB24 985 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 HHIPQ96QV1 700 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 FAM83CQ9BQN1 747 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 SLC46A2Q9BY10 475 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 DUSP15Q9H1R2 295 aaPredicted RBP17.19■□□□□ 0.34
SNCA-205ENST00000394991 FOXP1Q9H334 677 aaPredicted RBP17.19■□□□□ 0.34
SNCA-205ENST00000394991 VPS45Q9NRW7 570 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 PPP4R2Q9NY27 417 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 ANAPC1Q9H1A4 1944 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 AKAP13Q12802 2813 aa17.19■□□□□ 0.34
SNCA-205ENST00000394991 ASCC3Q8N3C0 2202 aaKnown RBP17.19■□□□□ 0.34
SNCA-205ENST00000394991 LACTBL1A8MY62 500 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 TRDMT1O14717 391 aaKnown RBP17.18■□□□□ 0.34
SNCA-205ENST00000394991 GIPC1O14908 333 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 CLDN3O15551 220 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 RNF40O75150 1001 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 EGFP01133 1207 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 CLTAP09496 248 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 CDC25AP30304 524 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 RAD51AP2Q09MP3 1159 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 PDIA5Q14554 519 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 NAIF1Q69YI7 327 aaPredicted RBP17.18■□□□□ 0.34
SNCA-205ENST00000394991 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 SENP8Q96LD8 212 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 SEPT5Q99719 369 aaPredicted RBP17.18■□□□□ 0.34
SNCA-205ENST00000394991 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
SNCA-205ENST00000394991 EBF3Q9H4W6 596 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 FBRSL1Q9HCM7 1045 aaKnown RBP17.18■□□□□ 0.34
SNCA-205ENST00000394991 HSFX1Q9UBD0 423 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 CCL26Q9Y258 94 aa17.18■□□□□ 0.34
SNCA-205ENST00000394991 FASNP49327 2511 aaKnown RBP17.17■□□□□ 0.34
SNCA-205ENST00000394991 DCLK1O15075 740 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 FAM189A1O60320 539 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 PLS3P13797 630 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 HOXB3P14651 431 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms