RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TMEM35BQ8NCS4 154 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 C1orf131Q8NDD1 294 aaKnown RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 TSPAN18Q96SJ8 248 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 TRIM7Q9C029 511 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 SENP6Q9GZR1 1112 aaPredicted RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 ARFGAP3Q9NP61 516 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 DMGDHQ9UI17 866 aaKnown RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 IPPQ9Y573 584 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 DNAH12Q6ZR08 3092 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 PPEF2O14830 753 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 KCNE1P15382 129 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 AKAP5P24588 427 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 PTPN11Q06124 597 aaPredicted RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 MAMLD1Q13495 774 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 GLRA4Q5JXX5 417 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 BEND6Q5SZJ8 279 aaPredicted RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 LIN9Q5TKA1 542 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 LRRC52Q8N7C0 313 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 BEST2Q8NFU1 509 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 HDAC7Q8WUI4 952 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 C18orf25Q96B23 403 aaPredicted RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 LHX5Q9H2C1 402 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 UBQLN1Q9UMX0 589 aaKnown RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 M0QZ92 97 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 RPLP2P05387 115 aaKnown RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 HOXD10P28358 340 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 RSPH3Q86UC2 560 aa15.9■□□□□ 0.14
CCT4-201ENST00000394440 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 BARX2Q9UMQ3 279 aaPredicted RBP15.9■□□□□ 0.14
CCT4-201ENST00000394440 SMIM28A0A1B0GU29 152 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 CHRNA1P02708 482 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 MCM3P25205 808 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 TNNC1P63316 161 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 MYO1EQ12965 1108 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 FAM47CQ5HY64 1035 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 CCDC70Q6NSX1 233 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 C8orf74Q6P047 294 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 TTC39CQ8N584 583 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 UBL4BQ8N7F7 174 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 PXYLP1Q8TE99 480 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 TMEM176AQ96HP8 235 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 MRPL47Q9HD33 250 aaKnown RBP15.89■□□□□ 0.13
CCT4-201ENST00000394440 DDX20Q9UHI6 824 aaKnown RBP15.89■□□□□ 0.13
CCT4-201ENST00000394440 PCDHA3Q9Y5H8 950 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 SCINQ9Y6U3 715 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
CCT4-201ENST00000394440 MED7O43513 233 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 RRP9O43818 475 aaKnown RBP15.89■□□□□ 0.13
CCT4-201ENST00000394440 ERLIN1O75477 346 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 CALB1P05937 261 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 LONRF2Q1L5Z9 754 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 DENND1BQ6P3S1 775 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 PCSK9Q8NBP7 692 aaKnown RBP15.89■□□□□ 0.13
CCT4-201ENST00000394440 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 FAM53CQ9NYF3 392 aa15.89■□□□□ 0.13
CCT4-201ENST00000394440 CCDC188H7C350 402 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 ATP8B1O43520 1251 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 SPOPO43791 374 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 CD19P15391 556 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 C9orf57Q5W0N0 161 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 PHLDB2Q86SQ0 1253 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 STIM2Q9P246 746 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 PIRO00625 290 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 RPS6KA5O75582 802 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 GNRH1P01148 92 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 FGGP02679 453 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 SLC1A1P43005 524 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 NDST1P52848 882 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 ORC1Q13415 861 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 KRT12Q99456 494 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 CYTH4Q9UIA0 394 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 L1RE1Q9UN81 338 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 ST3GAL5Q9UNP4 418 aa15.88■□□□□ 0.13
CCT4-201ENST00000394440 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCT4-201ENST00000394440 MYO1FO00160 1098 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 O00370 1275 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 PROSCO94903 275 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 CTSHP09668 335 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 VDRP11473 427 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 ZNF211Q13398 564 aaPredicted RBP15.87■□□□□ 0.13
CCT4-201ENST00000394440 PPP1R15BQ5SWA1 713 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 TWF2Q6IBS0 349 aaKnown RBP15.87■□□□□ 0.13
CCT4-201ENST00000394440 FUT8Q9BYC5 575 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 KLK14Q9P0G3 267 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 PARP2Q9UGN5 583 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 CEP83Q9Y592 693 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 TLR3O15455 904 aaKnown RBP15.87■□□□□ 0.13
CCT4-201ENST00000394440 ZMYND10O75800 440 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 SASH3O75995 380 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 CD4P01730 458 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 MYBL2P10244 700 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 ITGA4P13612 1032 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 CYP3A5P20815 502 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 TNFRSF8P28908 595 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 GSCP56915 257 aaPredicted RBP15.87■□□□□ 0.13
CCT4-201ENST00000394440 MRPS25P82663 173 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms