RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MFAP3P55082 362 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 FAM71AQ8IYT1 594 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 TTYH1Q9H313 450 aaPredicted RBP14.2□□□□□ -0.14
USP44-202ENST00000393091 SLC28A3Q9HAS3 691 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 NME7Q9Y5B8 376 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 TEX33O43247 280 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 HUS1O60921 280 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 SLC9A1P19634 815 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 FECHP22830 423 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 TNNC1P63316 161 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 UBXN1Q04323 297 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 RAB33AQ14088 237 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 TPGS2Q68CL5 300 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 ARHGEF19Q8IW93 802 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 MRPL43Q8N983 215 aaKnown RBP14.2□□□□□ -0.14
USP44-202ENST00000393091 UBXN6Q9BZV1 441 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 DNAI2Q9GZS0 605 aa14.2□□□□□ -0.14
USP44-202ENST00000393091 NUCKS1Q9H1E3 243 aaKnown RBP14.2□□□□□ -0.14
USP44-202ENST00000393091 PUF60Q9UHX1 559 aaKnown RBP14.2□□□□□ -0.14
USP44-202ENST00000393091 F8W810 466 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 UCHL3P15374 230 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 ZNF75DP51815 510 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 GPM6BQ13491 265 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 ARHGAP17Q68EM7 881 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 FAM117BQ6P1L5 589 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 TMEM130Q8N3G9 435 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 SLC22A17Q8WUG5 538 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 BAP1Q92560 729 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 TATDN2Q93075 761 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 XPO4Q9C0E2 1151 aaKnown RBP14.19□□□□□ -0.14
USP44-202ENST00000393091 ZNF576Q9H609 170 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 CAPN11Q9UMQ6 739 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 CHD9Q3L8U1 2897 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
USP44-202ENST00000393091 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
USP44-202ENST00000393091 LILRA6Q6PI73 481 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 TAS1R1Q7RTX1 841 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 METTL23Q86XA0 190 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 ADGRF2Q8IZF7 708 aa14.19□□□□□ -0.14
USP44-202ENST00000393091 C2orf71A6NGG8 1288 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 EPOPA6NHQ4 379 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 SOX1O00570 391 aaPredicted RBP14.18□□□□□ -0.14
USP44-202ENST00000393091 SERPINC1P01008 464 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 MAGEA11P43364 429 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 BRCC3P46736 316 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 RPL34P49207 117 aaKnown RBP14.18□□□□□ -0.14
USP44-202ENST00000393091 SYCP1Q15431 976 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 WDR72Q3MJ13 1102 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 HABP4Q5JVS0 413 aaKnown RBP14.18□□□□□ -0.14
USP44-202ENST00000393091 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 AIPL1Q9NZN9 384 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 IFNKQ9P0W0 207 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 PCSK1P29120 753 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 NDUFV1P49821 464 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
USP44-202ENST00000393091 PTPROQ16827 1216 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 IQCEQ6IPM2 695 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 DSTYKQ6XUX3 929 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 OSTM1Q86WC4 334 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 FUBP3Q96I24 572 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP44-202ENST00000393091 POLIQ9UNA4 740 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP44-202ENST00000393091 GPR17Q13304 367 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
USP44-202ENST00000393091 ZNF280DQ6N043 979 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 PPFIBP1Q86W92 1011 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 THEM5Q8N1Q8 247 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 SYT11Q9BT88 431 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 SMYD3Q9H7B4 428 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 TRANK1O15050 2925 aa14.18□□□□□ -0.14
USP44-202ENST00000393091 GRM6O15303 877 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 LRRN2O75325 713 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 KRT19P08727 400 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 ANXA13P27216 316 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 PRKCIP41743 596 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 CDK17Q00537 523 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 YWHAHQ04917 246 aaPredicted RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 STILQ15468 1287 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 INTS6LQ5JSJ4 861 aaKnown RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 CYP26C1Q6V0L0 522 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 VPS52Q8N1B4 723 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 FAM84AQ96KN4 292 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 CLSTN3Q9BQT9 956 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 MRPL45Q9BRJ2 306 aaKnown RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 MRPL17Q9NRX2 175 aaKnown RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 CISHQ9NSE2 258 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 COMMD8Q9NX08 183 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 PRG3Q9Y2Y8 225 aaPredicted RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 SNX9Q9Y5X1 595 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 HOXA9P31269 272 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 RAD23BP54727 409 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 SPECC1LQ69YQ0 1117 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 OVOS1Q6IE37 1185 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 ZNF677Q86XU0 584 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 KLHL5Q96PQ7 755 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 LSM14BQ9BX40 385 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms