RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 WDR60Q8WVS4 1066 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PTPRN2Q92932 1015 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 FAM32AQ9Y421 112 aaKnown RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-204ENST00000391814 FMO5P49326 533 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 DCAF4Q8WV16 495 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PPP2R3CQ969Q6 453 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 HES6Q96HZ4 224 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 PARVBQ9HBI1 364 aa16.86■□□□□ 0.29
SHANK1-204ENST00000391814 TMEM191CA6NGB0 347 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 TRIM49D1C9J1S8 452 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 CLVS1Q8IUQ0 354 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-204ENST00000391814 FAM71DQ8N9W8 422 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 USP33Q8TEY7 942 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 SOX13Q9UN79 622 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 AHCYL1O43865 530 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 TMEM253P0C7T8 217 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 RAG1P15918 1043 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 SMTNL2Q2TAL5 461 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-204ENST00000391814 ALG6Q9Y672 507 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 KIF1BO60333 1816 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 RCSD1Q6JBY9 416 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 ZFRQ96KR1 1074 aaKnown RBP16.85■□□□□ 0.29
SHANK1-204ENST00000391814 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 LXNQ9BS40 222 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 PDXKO00764 312 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 PAPD7Q5XG87 772 aaKnown RBP16.85■□□□□ 0.29
SHANK1-204ENST00000391814 EHD4Q9H223 541 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 SAC3D1A6NKF1 404 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 FKBP6O75344 327 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 RHOBTB1O94844 696 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 MFN2O95140 757 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 RALAP11233 206 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 STXBP2Q15833 593 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 TRIM69Q86WT6 500 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 ADGRF4Q8IZF3 695 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.85■□□□□ 0.29
SHANK1-204ENST00000391814 ZNF446Q9NWS9 450 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 CAPN6Q9Y6Q1 641 aa16.85■□□□□ 0.29
SHANK1-204ENST00000391814 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 SPDYE7PQ495Y7 208 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 CACNA2D2Q9NY47 1150 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 CPDO75976 1380 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 TAF4O00268 1085 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 COG2Q14746 738 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 LRRC6Q86X45 466 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 GRIP2Q9C0E4 1043 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 ATAD3AQ9NVI7 634 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 RBAKQ9NYW8 714 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 USP21Q9UK80 565 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 POLIQ9UNA4 740 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 LRCH1Q9Y2L9 728 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 LEMD3Q9Y2U8 911 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 C5orf58C9J3I9 102 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 GLI1P08151 1106 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 THRAP10827 490 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 MAPK7Q13164 816 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 ORC2Q13416 577 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 SRBD1Q8N5C6 995 aaKnown RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 TRIM63Q969Q1 353 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 FAM192AQ9GZU8 254 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 SLC5A4Q9NY91 659 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 PCDHGB4Q9UN71 923 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 P4HBP07237 508 aaKnown RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 KCTD17Q8N5Z5 321 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 CDHR1Q96JP9 859 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 DNAJC7Q99615 494 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 TRPC5OSA6NMA1 111 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 OPLAHO14841 1288 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 ZNF263O14978 683 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 ZNF483Q8TF39 744 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 C6orf62Q9GZU0 229 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-204ENST00000391814 THAP2Q9H0W7 228 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 SYTL2Q9HCH5 934 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 MPP6Q9NZW5 540 aa16.84■□□□□ 0.29
SHANK1-204ENST00000391814 NEDD8Q15843 81 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 IRGCQ6NXR0 463 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 B3GNT6Q6ZMB0 384 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 DHX36Q9H2U1 1008 aaKnown RBP16.83■□□□□ 0.29
SHANK1-204ENST00000391814 DNAJC16Q9Y2G8 782 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 STK4Q13043 487 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 TNFAIP1Q13829 316 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 USPL1Q5W0Q7 1092 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 STK32AQ8WU08 396 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 PACSIN1Q9BY11 444 aa16.83■□□□□ 0.29
SHANK1-204ENST00000391814 PSMC6P62333 389 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 OTUB1Q96FW1 271 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-204ENST00000391814 MKL2Q9ULH7 1088 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 MYMKA6NI61 221 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 PARNO95453 639 aaKnown RBP16.83■□□□□ 0.28
SHANK1-204ENST00000391814 FAM81AQ8TBF8 368 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 CD274Q9NZQ7 290 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms