RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 CCDC113Q9H0I3 377 aa10.61□□□□□ -0.71
TRAV18-201ENST00000390446 EBF1Q9UH73 591 aa10.61□□□□□ -0.71
TRAV18-201ENST00000390446 PCDHB9Q9Y5E1 797 aa10.61□□□□□ -0.71
TRAV18-201ENST00000390446 SNX14Q9Y5W7 946 aa10.61□□□□□ -0.71
TRAV18-201ENST00000390446 NEMFO60524 1076 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 ALDH1A2O94788 518 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 EDN1P05305 212 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 KCNE1P15382 129 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CYP11B2P19099 503 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 KRT2P35908 639 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 TUFMP49411 452 aaKnown RBP10.6□□□□□ -0.71
TRAV18-201ENST00000390446 SEC13P55735 322 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 NR1H3Q13133 447 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 GPR17Q13304 367 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 NPY5RQ15761 445 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
TRAV18-201ENST00000390446 OVOS1Q6IE37 1185 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CENPPQ6IPU0 288 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CMTM8Q8IZV2 173 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 PGBD3Q8N328 593 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CPA6Q8N4T0 437 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 MAB21L3Q8N8X9 362 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CD101Q93033 1021 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CHFRQ96EP1 664 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 SPACA7Q96KW9 195 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 LPIN3Q9BQK8 851 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 SLC46A2Q9BY10 475 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 MRPL4Q9BYD3 311 aaKnown RBP10.6□□□□□ -0.71
TRAV18-201ENST00000390446 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CDT1Q9H211 546 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CCDC86Q9H6F5 360 aaKnown RBP10.6□□□□□ -0.71
TRAV18-201ENST00000390446 TUFT1Q9NNX1 390 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 BCCIPQ9P287 314 aaKnown RBP eCLIP10.6□□□□□ -0.71
TRAV18-201ENST00000390446 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
TRAV18-201ENST00000390446 CDC45O75419 566 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 OAZ2O95190 189 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 MCF2P10911 925 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 ARSAP15289 507 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 ENGP17813 658 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 GFPT1Q06210 699 aaPredicted RBP10.59□□□□□ -0.71
TRAV18-201ENST00000390446 SCAPQ12770 1279 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 PDGFRLQ15198 375 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 C2orf27AQ580R0 203 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 ALKAL1Q6UXT8 129 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 FBXL16Q8N461 479 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 GIPC2Q8TF65 315 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 WASF1Q92558 559 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 KIFAP3Q92845 792 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 ZNF274Q96GC6 653 aaPredicted RBP10.59□□□□□ -0.71
TRAV18-201ENST00000390446 LRIG1Q96JA1 1093 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 FAM83CQ9BQN1 747 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 POLR3CQ9BUI4 534 aaPredicted RBP10.59□□□□□ -0.71
TRAV18-201ENST00000390446 TARS2Q9BW92 718 aaKnown RBP10.59□□□□□ -0.71
TRAV18-201ENST00000390446 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
TRAV18-201ENST00000390446 HPS4Q9NQG7 708 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 TDP1Q9NUW8 608 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 ZMYM5Q9UJ78 669 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 GPSM3Q9Y4H4 160 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 CYP46A1Q9Y6A2 500 aa10.59□□□□□ -0.71
TRAV18-201ENST00000390446 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 MTMR11A4FU01 709 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 OTOL1A6NHN0 477 aaPredicted RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 TULP1O00294 542 aaPredicted RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 OPHN1O60890 802 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 MED24O75448 989 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 SPATA31C1P0DKV0 1188 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 BCKDHBP21953 392 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 WEE1P30291 646 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 GJA4P35212 333 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 DPP6P42658 865 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 IFNAR2P48551 515 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 PEX3P56589 373 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 SPAG1Q07617 926 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 STRN3Q13033 797 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 NR5A1Q13285 461 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 ZNF423Q2M1K9 1284 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 SLC39A12Q504Y0 691 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 SEZ6Q53EL9 994 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 XKR4Q5GH76 650 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 EARS2Q5JPH6 523 aaKnown RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 SYT12Q8IV01 421 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 TMEFF1Q8IYR6 380 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 CCDC33Q8N5R6 958 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 BEST2Q8NFU1 509 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 MRPS31Q92665 395 aaKnown RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 YTHDC1Q96MU7 727 aaKnown RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 CRISPLD1Q9H336 500 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 GJB4Q9NTQ9 266 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 DUS2Q9NX74 493 aaKnown RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
TRAV18-201ENST00000390446 EVLQ9UI08 416 aaPredicted RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 MAGED2Q9UNF1 606 aaPredicted RBP10.58□□□□□ -0.72
TRAV18-201ENST00000390446 M0QZQ0 153 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms