RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 BEX3Q00994 111 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 IMPG1Q17R60 797 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CCDC38Q502W7 563 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 MOB2Q70IA6 237 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 GPATCH11Q8N954 259 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CYP3A43Q9HB55 503 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SNTG2Q9NY99 539 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CYP39A1Q9NYL5 469 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SLC4A7Q9Y6M7 1214 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.68
PKP4-201ENST00000389757 SLITRK3O94933 977 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 APRTP07741 180 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 MBL2P11226 248 aaPredicted RBP10.77□□□□□ -0.68
PKP4-201ENST00000389757 TYK2P29597 1187 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 PSMC6P62333 389 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 TWF1Q12792 350 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 ART3Q13508 389 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 KIF19Q2TAC6 998 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 TRAPPC12Q8WVT3 735 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 TUBB6Q9BUF5 446 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 RAB6BQ9NRW1 208 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 AMACRQ9UHK6 382 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 SLC30A1Q9Y6M5 507 aa10.77□□□□□ -0.68
PKP4-201ENST00000389757 H0Y626 953 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 M0QYT0 321 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 FOXP2O15409 715 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 MTSS1O43312 755 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 CYP3A4P08684 503 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 COMTP21964 271 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 BCAT1P54687 386 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 EPHB3P54753 998 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 MAP2K5Q13163 448 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 SMAD1Q15797 465 aaKnown RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 CYFIP2Q96F07 1278 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 TSSK1BQ9BXA7 367 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 MRPL9Q9BYD2 267 aaKnown RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 OSBPL8Q9BZF1 889 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 WDCPQ9H6R7 721 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 CAPN7Q9Y6W3 813 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 TMEM247A6NEH6 219 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 UBA1P22314 1058 aaKnown RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 EPHB2P29323 1055 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ORC1Q13415 861 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ACAD10Q6JQN1 1059 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 EPM2AIP1Q7L775 607 aaPredicted RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 SCFD1Q8WVM8 642 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 WNK4Q96J92 1243 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 GTF3C4Q9UKN8 822 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ITGA11Q9UKX5 1188 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 HPSEQ9Y251 543 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 GNGT2O14610 69 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ZNF197O14709 1029 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 POMCP01189 267 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 PON1P27169 355 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 AKT1P31749 480 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ZNF177Q13360 481 aaPredicted RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 TBC1D1Q86TI0 1168 aaPredicted RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 MIB1Q86YT6 1006 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 SPATA4Q8NEY3 305 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 TSR3Q9UJK0 312 aaKnown RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 F9P00740 461 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 CDR2Q01850 454 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 ANGPTL8Q6UXH0 198 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 VSIG10LQ86VR7 867 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 RPRD1AQ96P16 312 aaPredicted RBP10.77□□□□□ -0.69
PKP4-201ENST00000389757 FAM96AQ9H5X1 160 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 NR2E3Q9Y5X4 410 aa10.77□□□□□ -0.69
PKP4-201ENST00000389757 TMEM88BA6NKF7 163 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 CYTH3O43739 400 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 PHF2O75151 1096 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 GYPCP04921 128 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 DNAJB2P25686 324 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 NUGGCQ68CJ6 796 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 GPR142Q7Z601 462 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 RNF135Q8IUD6 432 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 SPATA18Q8TC71 538 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 UCMAQ8WVF2 138 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 APBA2Q99767 749 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 USP27XA6NNY8 438 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 FOXN3O00409 490 aaPredicted RBP10.76□□□□□ -0.69
PKP4-201ENST00000389757 ACKR2O00590 384 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 MYL6P60660 151 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 IFT88Q13099 833 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 NCAPHQ15003 741 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 SMTNL2Q2TAL5 461 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 SYTL3Q4VX76 610 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 MTHFD1LQ6UB35 978 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 KLRG1Q96E93 195 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 SENP6Q9GZR1 1112 aaPredicted RBP10.76□□□□□ -0.69
PKP4-201ENST00000389757 KRT82Q9NSB4 513 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 F5H5T6 163 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 CST8O60676 142 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 FBXO21O94952 628 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 FGFR4P22455 802 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 MUM1Q2TAK8 710 aa10.76□□□□□ -0.69
PKP4-201ENST00000389757 HABP4Q5JVS0 413 aaKnown RBP10.76□□□□□ -0.69
PKP4-201ENST00000389757 CELF3Q5SZQ8 465 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms