RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 DAW1Q8N136 415 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 ATAD1Q8NBU5 361 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 SMOC1Q9H4F8 434 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 SPEGQ15772 3267 aa23.24■■□□□ 1.31
CNEP1R1-201ENST00000389134 TCHHQ07283 1943 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 TYMPP19971 482 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 CYP3A5P20815 502 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 CDC25CP30307 473 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 STRN3Q13033 797 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 ME3Q16798 604 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 PLK5Q496M5 336 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 OVOS1Q6IE37 1185 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 ARMCX5Q6P1M9 558 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 UNQ6494/PRO21346Q6UXR6 183 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 NTPCRQ9BSD7 190 aaKnown RBP23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 GKN1Q9NS71 199 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 ANKFY1Q9P2R3 1169 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 LRWD1Q9UFC0 647 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 KCNG1Q9UIX4 513 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 ZMYM5Q9UJ78 669 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 ZMIZ1Q9ULJ6 1067 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 DNM3Q9UQ16 869 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 MYO16Q9Y6X6 1858 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 SCN1AP35498 2009 aa23.23■■□□□ 1.31
CNEP1R1-201ENST00000389134 TRDMT1O14717 391 aaKnown RBP23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 SLC16A4O15374 487 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 JAK2O60674 1132 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 NOVA1P51513 510 aaKnown RBP23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 AMPD2Q01433 879 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 COL9A2Q14055 689 aaPredicted RBP23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 PDIA5Q14554 519 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 ZBTB6Q15916 424 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 SEZ6Q53EL9 994 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 FSTL4Q6MZW2 842 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 KDF1Q8NAX2 398 aaPredicted RBP23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 KIF12Q96FN5 646 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 GCNAQ96QF7 691 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 UBQLN1Q9UMX0 589 aaKnown RBP23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 PKD1L2Q7Z442 2459 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 OBSL1O75147 1896 aa23.22■■□□□ 1.31
CNEP1R1-201ENST00000389134 C1QTNF9BB2RNN3 333 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 CLDN3O15551 220 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 XPOTO43592 962 aaKnown RBP23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 RHOBTB1O94844 696 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 C1QTNF9P0C862 333 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 CXCL8P10145 99 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 TUFMP49411 452 aaKnown RBP23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 RUNX3Q13761 415 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 VEPH1Q14D04 833 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 ELF2Q15723 593 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 ZPBP2Q6X784 338 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 TTC9BQ8N6N2 239 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 FAM83CQ9BQN1 747 aa23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 DUSP15Q9H1R2 295 aaPredicted RBP23.21■■□□□ 1.31
CNEP1R1-201ENST00000389134 TTC26A0AVF1 554 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 SOAT2O75908 522 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 LARGE1O95461 756 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 CLTAP09496 248 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 CYP4F8P98187 520 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 SPAG1Q07617 926 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 MCL1Q07820 350 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 MAPK7Q13164 816 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 KARSQ15046 597 aaKnown RBP23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 DAB2IPQ5VWQ8 1189 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 RINT1Q6NUQ1 792 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 SNX29Q8TEQ0 813 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 EDEM2Q9BV94 578 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 TIPINQ9BVW5 301 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 RAB34Q9BZG1 259 aa23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 DSPP15924 2871 aaKnown RBP23.2■■□□□ 1.3
CNEP1R1-201ENST00000389134 TSC2P49815 1807 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 AKAP13Q12802 2813 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 DMXL2Q8TDJ6 3036 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 E9PMD0 336 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 RNF40O75150 1001 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 DRD1P21728 446 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 PAX3P23760 479 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 SMTNP53814 917 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 ANAPC15P60006 121 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 TTC38Q5R3I4 469 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 TCEAL6Q6IPX3 200 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 C1orf186Q6ZWK4 172 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 CMTM8Q8IZV2 173 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 TMEM130Q8N3G9 435 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 SPIRE2Q8WWL2 714 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 TCEAL3Q969E4 200 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 EXOC4Q96A65 974 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 TSPAN18Q96SJ8 248 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 RUSC1Q9BVN2 902 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 SLC46A2Q9BY10 475 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 FOXP1Q9H334 677 aaPredicted RBP23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 IL21Q9HBE4 155 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 HPS4Q9NQG7 708 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 KIAA1549LQ6ZVL6 1849 aa23.19■■□□□ 1.3
CNEP1R1-201ENST00000389134 TMEM8BA6NDV4 472 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 C4orf47A7E2U8 309 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 CAVIN2O95810 425 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 ODC1P11926 461 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 MATR3P43243 847 aaKnown RBP eCLIP23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 GUCY1B3Q02153 619 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms