RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.27
COL2A1-202ENST00000380518 GPRASP2Q96D09 838 aa16.77■□□□□ 0.27
COL2A1-202ENST00000380518 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.27
COL2A1-202ENST00000380518 THTPAQ9BU02 230 aa16.77■□□□□ 0.27
COL2A1-202ENST00000380518 A0A087X0T9 212 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SYNDIG1LA6NDD5 238 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 B2RBV5 119 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 MSH4O15457 936 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 FAM228BP0C875 321 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CCND1P24385 295 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 ATP6V1E1P36543 226 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 KLC1Q07866 573 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 GJB7Q6PEY0 223 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SETD3Q86TU7 594 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 AGBL1Q96MI9 1066 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SERPINB12Q96P63 405 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CATSPERBQ9H7T0 1116 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 LATS2Q9NRM7 1088 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 ABCA6Q8N139 1617 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 STIP1P31948 543 aaKnown RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 VCPP55072 806 aaKnown RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 GRB10Q13322 594 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 KRT72Q14CN4 511 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SMTNL2Q2TAL5 461 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 DCAF6Q58WW2 860 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 EFCAB12Q6NXP0 572 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 KCNB2Q92953 911 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 E2F7Q96AV8 911 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 EME1Q96AY2 570 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 THAP2Q9H0W7 228 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 NEUROG2Q9H2A3 272 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 PCDHB8Q9UN66 801 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 C6orf222P0C671 652 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 MAP4P27816 1152 aaKnown RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 MAPK7Q13164 816 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 PTGISQ16647 500 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 FIGNQ5HY92 759 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 TRIM65Q6PJ69 517 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SLC7A14Q8TBB6 771 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 H0Y626 953 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 TRIM16O95361 564 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 SYF2O95926 243 aaKnown RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CTSHP09668 335 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 CYP2C8P10632 490 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 LRRC71Q8N4P6 559 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 ARMC2Q8NEN0 867 aa16.76■□□□□ 0.27
COL2A1-202ENST00000380518 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-202ENST00000380518 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 ZNF263O14978 683 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 AKAP10O43572 662 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 SLC37A4O43826 429 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 GAS2O43903 313 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 ITGA4P13612 1032 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 MUTP22033 750 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 HSD17B3P37058 310 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 SNAPC2Q13487 334 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 NBPF20Q3BBV1 942 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 NAPEPLDQ6IQ20 393 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 PABPC3Q9H361 631 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 GEMIN4P57678 1058 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 RPS6P62753 249 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 SPDYAQ5MJ70 313 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 CCDC134Q9H6E4 229 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 MANSC1Q9H8J5 431 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 CDYLQ9Y232 598 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 C16orf96A6NNT2 1141 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 PRPF4O43172 522 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 CYP2C9P11712 490 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 BRD2P25440 801 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 ERVK-24P63145 666 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 TAF1CQ15572 869 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 VPS72Q15906 364 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 LRRC8BQ6P9F7 803 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 NUDT18Q6ZVK8 323 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 DCP1BQ8IZD4 617 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 NUP93Q8N1F7 819 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 FAM71DQ8N9W8 422 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 UBA3Q8TBC4 463 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 ZNF507Q8TCN5 953 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 METTL5Q9NRN9 209 aaKnown RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 SEC24DO94855 1032 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 PLEKP08567 350 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-202ENST00000380518 HLA-DPA1P20036 260 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 PTGER2P43116 358 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 CUL2Q13617 745 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 SNX17Q15036 470 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 MTFR1Q15390 333 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 HPSEQ9Y251 543 aa16.75■□□□□ 0.27
COL2A1-202ENST00000380518 AIM2O14862 343 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 SRP72O76094 671 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms