RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SPOCD1Q6ZMY3 1216 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 SCYL3Q8IZE3 742 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 KLHL29Q96CT2 875 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 TEX13BQ9BXU2 312 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 MCM8Q9UJA3 840 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
VPS16-203ENST00000380469 IVNS1ABPQ9Y6Y0 642 aa17.25■□□□□ 0.35
VPS16-203ENST00000380469 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 EGFRP00533 1210 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 HMGCS2P54868 508 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 IRX3P78415 501 aaPredicted RBP17.24■□□□□ 0.35
VPS16-203ENST00000380469 SP2Q02086 613 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 ZNF268Q14587 947 aaPredicted RBP17.24■□□□□ 0.35
VPS16-203ENST00000380469 MORF4L2Q15014 288 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 NBPF12Q5TAG4 269 aaPredicted RBP17.24■□□□□ 0.35
VPS16-203ENST00000380469 RNF43Q68DV7 783 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TDRPQ86YL5 185 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TMEM35BQ8NCS4 154 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 MCEEQ96PE7 176 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 DDX56Q9NY93 547 aaKnown RBP17.24■□□□□ 0.35
VPS16-203ENST00000380469 ADAMTS5Q9UNA0 930 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 A0A1B0GUA9 196 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 POC1B-GALNT4F8VUJ3 575 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 IGF2BP3O00425 579 aaKnown RBP eCLIP17.24■□□□□ 0.35
VPS16-203ENST00000380469 ATG7O95352 703 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 ZSCAN5DPP0CG00 497 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TCF4P15884 667 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TGFB2P61812 414 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TAP1Q03518 808 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 PIGHQ14442 188 aaPredicted RBP17.24■□□□□ 0.35
VPS16-203ENST00000380469 STXBP2Q15833 593 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TMEM63BQ5T3F8 832 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TRABD2AQ86V40 505 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 FITM2Q8N6M3 262 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 TBC1D31Q96DN5 1066 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 VPS37BQ9H9H4 285 aa17.24■□□□□ 0.35
VPS16-203ENST00000380469 ADGRA2Q96PE1 1338 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 COL11A1P12107 1806 aaPredicted RBP17.23■□□□□ 0.35
VPS16-203ENST00000380469 PARP14Q460N5 1801 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 F8VP50 259 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 ETS1P14921 441 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 PECAM1P16284 738 aaPredicted RBP17.23■□□□□ 0.35
VPS16-203ENST00000380469 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
VPS16-203ENST00000380469 VCPP55072 806 aaKnown RBP17.23■□□□□ 0.35
VPS16-203ENST00000380469 KCNJ2P63252 427 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 PLCB3Q01970 1234 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 ACVR2BQ13705 512 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 SEZ6Q53EL9 994 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 TFDP3Q5H9I0 405 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
VPS16-203ENST00000380469 GLIS1Q8NBF1 620 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 NIFKQ9BYG3 293 aaKnown RBP17.23■□□□□ 0.35
VPS16-203ENST00000380469 TRABDQ9H4I3 376 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 SENP1Q9P0U3 644 aa17.23■□□□□ 0.35
VPS16-203ENST00000380469 SPAG7O75391 227 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 PTPRAP18433 802 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 KRT15P19012 456 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 FOXN2P32314 431 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 PTPN7P35236 360 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 RFC5P40937 340 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 CGB2Q6NT52 195 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 CENPUQ71F23 418 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 UBR7Q8N806 425 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 SMC6Q96SB8 1091 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 ZNF518BQ9C0D4 1074 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 NRBP2Q9NSY0 501 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 PRPF4O43172 522 aaKnown RBP eCLIP17.22■□□□□ 0.356e-8■■■□□ 15.4
VPS16-203ENST00000380469 ASS1P00966 412 aaKnown RBP17.22■□□□□ 0.35
VPS16-203ENST00000380469 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
VPS16-203ENST00000380469 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
VPS16-203ENST00000380469 SPARCL1Q14515 664 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 WDR49Q8IV35 697 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 RMDN2Q96LZ7 410 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 TCHPQ9BT92 498 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 MAF1Q9H063 256 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 PPCSQ9HAB8 311 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
VPS16-203ENST00000380469 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
VPS16-203ENST00000380469 hCG_1818297A0A087WSY0 165 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 LRRD1A4D1F6 860 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 SGK1O00141 431 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ALOX15BO15296 676 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ADCY3O60266 1144 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ASMTLO95671 621 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ITGAVP06756 1048 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 BRD2P25440 801 aaKnown RBP17.21■□□□□ 0.35
VPS16-203ENST00000380469 GCAP28676 217 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ICAM3P32942 547 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 SLC18A1P54219 525 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ZNF252P-AS1Q0IIN9 211 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 CCDC15Q0P6D6 951 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 HP1BP3Q5SSJ5 553 aaPredicted RBP17.21■□□□□ 0.35
VPS16-203ENST00000380469 FAM47EQ6ZV65 393 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ERICH1Q86X53 443 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ZBED8Q8IZ13 594 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms