RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 COL4A3Q01955 1670 aa25.68■■□□□ 1.7
CDKN2A-203ENST00000380151 TCHHQ07283 1943 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 EIF3DO15371 548 aaKnown RBP eCLIP25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 PNPLA4P41247 253 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 ALDH1A3P47895 512 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 SNW1Q13573 536 aaKnown RBP25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 LMBRD2Q68DH5 695 aaPredicted RBP25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 SCARA3Q6AZY7 606 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 PHLDB3Q6NSJ2 640 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 UNC13DQ70J99 1090 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 EPM2AIP1Q7L775 607 aaPredicted RBP25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 TMC8Q8IU68 726 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 DTWD2Q8NBA8 298 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 SHKBP1Q8TBC3 707 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 CACTINQ8WUQ7 758 aaKnown RBP25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 ZSWIM3Q96MP5 696 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 FOXQ1Q9C009 403 aa25.67■■□□□ 1.7
CDKN2A-203ENST00000380151 KIAA0391O15091 583 aaKnown RBP25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 BFSP1Q12934 665 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 TEAD2Q15562 447 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 MLF2Q15773 248 aaPredicted RBP25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 CBWD2Q8IUF1 395 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 GRAMD1CQ8IYS0 662 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 THEM5Q8N1Q8 247 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 ELSPBP1Q96BH3 223 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 ASB16Q96NS5 453 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 SEPT5Q99719 369 aaPredicted RBP25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 LRRC3Q9BY71 257 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 HSPBP1Q9NZL4 362 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 RCOR1Q9UKL0 485 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 ITGA11Q9UKX5 1188 aa25.66■■□□□ 1.7
CDKN2A-203ENST00000380151 DCNP07585 359 aaKnown RBP25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 KRT19P08727 400 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 TMEM191BP0C7N4 346 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 AFMP43652 599 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 PFKPQ01813 784 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 EHHADHQ08426 723 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 NELFCDQ8IXH7 590 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 CSGALNACT2Q8N6G5 542 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 CXorf38Q8TB03 319 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 CHAMP1Q96JM3 812 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 SLITRK6Q9H5Y7 841 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 ZFP14Q9HCL3 533 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 SIX4Q9UIU6 781 aa25.65■■□□□ 1.7
CDKN2A-203ENST00000380151 PTPRJQ12913 1337 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 A0A1W2PRU2 124 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 CUL4BQ13620 913 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 GRM2Q14416 872 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 MGAT5BQ3V5L5 792 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 SLC44A4Q53GD3 710 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 LRRTM3Q86VH5 581 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 PDCL2Q8N4E4 241 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 LRRC52Q8N7C0 313 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 ZNF507Q8TCN5 953 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 SMARCD2Q92925 531 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 SHDQ96IW2 340 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 LPIN3Q9BQK8 851 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 ZNF334Q9HCZ1 680 aaPredicted RBP25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 AGPAT3Q9NRZ7 376 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 L1RE1Q9UN81 338 aa25.64■■□□□ 1.7
CDKN2A-203ENST00000380151 UBE4BO95155 1302 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 ZNF233A6NK53 670 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 STARD6P59095 220 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 CEP57L1Q8IYX8 460 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 PJA1Q8NG27 643 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 OR5B17Q8NGF7 314 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 ZSCAN18Q8TBC5 510 aaPredicted RBP25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 SCFD1Q8WVM8 642 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 PSMG2Q969U7 264 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 ABI2Q9NYB9 513 aaPredicted RBP25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 HSFX1Q9UBD0 423 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 SERTAD1Q9UHV2 236 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 SIT1Q9Y3P8 196 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 ASB3Q9Y575 518 aa25.63■■□□□ 1.69
CDKN2A-203ENST00000380151 TGFB1I1O43294 461 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 LRRN2O75325 713 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 ATF6P18850 670 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 VIPR2P41587 438 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 CYP2J2P51589 502 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 RBP5P82980 135 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 ANGPT1Q15389 498 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 DNAJB7Q7Z6W7 309 aaPredicted RBP25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 FAM200AQ8TCP9 573 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 ANKRD36BP1Q96IX9 119 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 SLC39A2Q9NP94 309 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 INTS13Q9NVM9 706 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 ZDHHC9Q9Y397 364 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 NCANO14594 1321 aa25.62■■□□□ 1.69
CDKN2A-203ENST00000380151 ACTN4O43707 911 aaKnown RBP25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 HUS1O60921 280 aa25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 TUFMP49411 452 aaKnown RBP25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 PRKCQQ04759 706 aa25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 STXBP5Q5T5C0 1151 aa25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 VITQ6UXI7 678 aa25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 ITIH5Q86UX2 942 aa25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 DCP1BQ8IZD4 617 aaKnown RBP25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 SPPL2BQ8TCT7 592 aa25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 LEO1Q8WVC0 666 aaPredicted RBP25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 DDX23Q9BUQ8 820 aaKnown RBP25.61■■□□□ 1.69
CDKN2A-203ENST00000380151 TMLHEQ9NVH6 421 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms