RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 PTENP60484 403 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 PTPN20Q4JDL3 420 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 KDELC2Q7Z4H8 507 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 RIOX2Q8IUF8 465 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 ZBED8Q8IZ13 594 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 C1orf127Q8N9H9 656 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 FAM71DQ8N9W8 422 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 LPPQ93052 612 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
BRF1-203ENST00000379937 TUBGCP4Q9UGJ1 667 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.232e-6■■■■■ 56.4
BRF1-203ENST00000379937 PHF2O75151 1096 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 CNMDO75829 334 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 KRT3P12035 628 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 OSBPP22059 807 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 HUNKP57058 714 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 EFTUD2Q15029 972 aaKnown RBP eCLIP16.5■□□□□ 0.238e-7■■■■■ 50.8
BRF1-203ENST00000379937 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 ABRAQ8N0Z2 381 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 SYT11Q9BT88 431 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 DPEP3Q9H4B8 488 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 MTRF1LQ9UGC7 380 aaKnown RBP16.5■□□□□ 0.23
BRF1-203ENST00000379937 CAPN7Q9Y6W3 813 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 NOMO3P69849 1222 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 ZNF662Q6ZS27 426 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 HACE1Q8IYU2 909 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 GOLGA6L7A0A1B0GV03 622 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 CLDN5O00501 218 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
BRF1-203ENST00000379937 CCDC130P13994 396 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 KRT15P19012 456 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 ARL2P36404 184 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 GDF10P55107 478 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 NIPA1Q7RTP0 329 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 CCT8L2Q96SF2 557 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRF1-203ENST00000379937 QSER1Q2KHR3 1735 aa16.5■□□□□ 0.23
BRF1-203ENST00000379937 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 GOLGA8KD6RF30 607 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 RASGRF2O14827 1237 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 NDST1P52848 882 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
BRF1-203ENST00000379937 PSMD6Q15008 389 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 SLFN11Q7Z7L1 901 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
BRF1-203ENST00000379937 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 HPDLQ96IR7 371 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 CEP83Q9Y592 693 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 DOCK3Q8IZD9 2030 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 SOCS7O14512 581 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 OGTO15294 1046 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 IL1R2P27930 398 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 ZDHHC24Q6UX98 284 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 CYP4X1Q8N118 509 aa16.49■□□□□ 0.23
BRF1-203ENST00000379937 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
BRF1-203ENST00000379937 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
BRF1-203ENST00000379937 MYH9P35579 1960 aaKnown RBP16.49■□□□□ 0.23
BRF1-203ENST00000379937 KIAA0100Q14667 2235 aaKnown RBP16.49■□□□□ 0.23
BRF1-203ENST00000379937 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 SPRED3Q2MJR0 410 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
BRF1-203ENST00000379937 CTAGE3PQ8IX95 158 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ATXN7L3BQ96GX2 97 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 FGD4Q96M96 766 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ACSS2Q9NR19 701 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 GOLGA4Q13439 2230 aaKnown RBP16.48■□□□□ 0.23
BRF1-203ENST00000379937 SZT2Q5T011 3432 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 PASKQ96RG2 1323 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 E5RJQ4 531 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 CCDC188H7C350 402 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 GARTP22102 1010 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 SSTR1P30872 391 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 CRADDP78560 199 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ALCAMQ13740 583 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ZBTB42B2RXF5 422 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 H7C0C1 242 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 MAFGO15525 162 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 MAFO75444 373 aaPredicted RBP16.48■□□□□ 0.23
BRF1-203ENST00000379937 LYPLA2O95372 231 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 TUBBP07437 444 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 ACO1P21399 889 aaKnown RBP16.48■□□□□ 0.23
BRF1-203ENST00000379937 ATP5OP48047 213 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 TUBB4BP68371 445 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 IL31Q6EBC2 164 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 OTUD6BQ8N6M0 293 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 CGRRF1Q99675 332 aa16.48■□□□□ 0.23
BRF1-203ENST00000379937 EIF3HO15372 352 aaKnown RBP eCLIP16.47■□□□□ 0.23
BRF1-203ENST00000379937 UNGP13051 313 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms