RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 FAM153CQ494X1 144 aa15.98■□□□□ 0.15
SNX2-201ENST00000379516 HSP90B2PQ58FF3 399 aa15.98■□□□□ 0.15
SNX2-201ENST00000379516 SLC13A5Q86YT5 568 aaPredicted RBP15.98■□□□□ 0.15
SNX2-201ENST00000379516 SLC4A11Q8NBS3 891 aa15.98■□□□□ 0.15
SNX2-201ENST00000379516 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.98■□□□□ 0.15
SNX2-201ENST00000379516 TWNKQ96RR1 684 aa15.98■□□□□ 0.15
SNX2-201ENST00000379516 HMGXB4Q9UGU5 601 aa15.98■□□□□ 0.15
SNX2-201ENST00000379516 FAM153AQ9UHL3 310 aa15.98■□□□□ 0.15
SNX2-201ENST00000379516 PIN4Q9Y237 131 aaKnown RBP15.98■□□□□ 0.15
SNX2-201ENST00000379516 UTP11Q9Y3A2 253 aaKnown RBP15.98■□□□□ 0.15
SNX2-201ENST00000379516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNX2-201ENST00000379516 DUSP11O75319 330 aaKnown RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 FCGRTP55899 365 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 RPL7AP62424 266 aaKnown RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 DR1Q01658 176 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 NNTQ13423 1086 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 CUL1Q13616 776 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 LLGL1Q15334 1064 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 DNAJC24Q6P3W2 148 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 DDX42Q86XP3 938 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNX2-201ENST00000379516 PRELID2Q8N945 189 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 TMEM176AQ96HP8 235 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 SNX27Q96L92 541 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 ZMAT2Q96NC0 199 aaKnown RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 ELOVL4Q9GZR5 314 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 USTQ9Y2C2 406 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 TCRBV7S2A1N4TA0A589 114 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 PHF2O75151 1096 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 AXLP30530 894 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 SSR1P43307 286 aaKnown RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 PTPN11Q06124 597 aaPredicted RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 GNASQ5JWF2 1037 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 MFSD14CQ5VZR4 134 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 ZDHHC14Q8IZN3 488 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 MAGOHBQ96A72 148 aaKnown RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 LHX5Q9H2C1 402 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 NXF3Q9H4D5 531 aaKnown RBP15.97■□□□□ 0.15
SNX2-201ENST00000379516 MTUS1Q9ULD2 1270 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 GABRQQ9UN88 632 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 DERAQ9Y315 318 aa15.97■□□□□ 0.15
SNX2-201ENST00000379516 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
SNX2-201ENST00000379516 STAU1O95793 577 aaKnown RBP15.96■□□□□ 0.15
SNX2-201ENST00000379516 AKAP5P24588 427 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 CHRNA3P32297 505 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 FAM193AP78312 1265 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 MYO1EQ12965 1108 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 CYP4A22Q5TCH4 519 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 DCUN1D2Q6PH85 259 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 NME8Q8N427 588 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 C18orf8Q96DM3 657 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 HEXIM2Q96MH2 286 aaKnown RBP15.96■□□□□ 0.15
SNX2-201ENST00000379516 MCEEQ96PE7 176 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 TRIM51Q9BSJ1 452 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 IP6K2Q9UHH9 426 aa15.96■□□□□ 0.15
SNX2-201ENST00000379516 TMEM191CA6NGB0 347 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 DAPK3O43293 454 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 RECQL4O94761 1208 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 AARSP49588 968 aaKnown RBP eCLIP15.95■□□□□ 0.143e-6■■■■■ 30
SNX2-201ENST00000379516 CRYBB1P53674 252 aaPredicted RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 GABPB1Q06547 395 aaPredicted RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 DHX34Q14147 1143 aaKnown RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 GLRA4Q5JXX5 417 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 RHOT1Q8IXI2 618 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 EIF1ADQ8N9N8 165 aaKnown RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 TSEN2Q8NCE0 465 aaKnown RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 BEST2Q8NFU1 509 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 TRIB2Q92519 343 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 DPH5Q9H2P9 285 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 PRDM10Q9NQV6 1147 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 RNF19AQ9NV58 838 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 TUBGCP4Q9UGJ1 667 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 BARX2Q9UMQ3 279 aaPredicted RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 TCRBV5S1A1TA0A578 114 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 GOLGA6BA6NDN3 693 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 O00370 1275 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 PSTPIP1O43586 416 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 RARAP10276 462 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 CYBAP13498 195 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 GGCXP38435 758 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 FLT3LGP49771 235 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 NDST1P52848 882 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 TAS2R40P59535 323 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 PTPN20Q4JDL3 420 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 DPH6Q7L8W6 267 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNX2-201ENST00000379516 C18orf25Q96B23 403 aaPredicted RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
SNX2-201ENST00000379516 TRIM31Q9BZY9 425 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 MED4Q9NPJ6 270 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNX2-201ENST00000379516 CYTH4Q9UIA0 394 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 STRIP2Q9ULQ0 834 aa15.95■□□□□ 0.14
SNX2-201ENST00000379516 FAM187AA6NFU0 413 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 PPEF2O14830 753 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 KPNA6O60684 536 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 MICAL2O94851 1124 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 PGK1P00558 417 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 VDRP11473 427 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms