RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SGO2Q562F6 1265 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 LRRC31Q6UY01 552 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 LEKR1Q6ZMV7 388 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 ANKRD23Q86SG2 305 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 MAML3Q96JK9 1138 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 PLVAPQ9BX97 442 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 LRRC4CQ9HCJ2 640 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 PARVAQ9NVD7 372 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 SLC45A1Q9Y2W3 748 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 SCINQ9Y6U3 715 aa15.76■□□□□ 0.11
PRNP-201ENST00000379440 ADCY6O43306 1168 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 PPFIA4O75335 1185 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 ITGB3P05106 788 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 TCF4P15884 667 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 ATP1A2P50993 1020 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 DRG2P55039 364 aaKnown RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 ZNF844Q08AG5 666 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 ZC3H12AQ5D1E8 599 aaKnown RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 CCDC50Q8IVM0 306 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 NLRP7Q8WX94 980 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 EMID1Q96A84 441 aaPredicted RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 LRRC19Q9H756 370 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
PRNP-201ENST00000379440 PODXLO00592 558 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 IL18RAPO95256 599 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 FGFR4P22455 802 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 FAM187BQ17R55 369 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 ATP13A4Q4VNC1 1196 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 MARCH8Q5T0T0 291 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 LRIG3Q6UXM1 1119 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 C12orf50Q8NA57 414 aaPredicted RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 NPLOC4Q8TAT6 608 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 PAIP2Q9BPZ3 127 aaKnown RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 TXLNGYQ9BZA5 131 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 SDCBP2Q9H190 292 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 TMBIM4Q9HC24 238 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
PRNP-201ENST00000379440 KLHL11Q9NVR0 708 aa15.75■□□□□ 0.11
PRNP-201ENST00000379440 PPFIA2O75334 1257 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 RALAP11233 206 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 TMOD1P28289 359 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 POU5F1BQ06416 359 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 SKIDA1Q1XH10 827 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 SLC10A6Q3KNW5 377 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 CYP4A22Q5TCH4 519 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
PRNP-201ENST00000379440 RHOT1Q8IXI2 618 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 TMEM35BQ8NCS4 154 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 ATP6V1G3Q96LB4 118 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 MCEEQ96PE7 176 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 FAM118BQ9BPY3 351 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 R3HDM2Q9Y2K5 976 aaKnown RBP15.74■□□□□ 0.11
PRNP-201ENST00000379440 TMEM191CA6NGB0 347 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 MCF2P10911 925 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 CD19P15391 556 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 FNTAP49354 379 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 LACTBP83111 547 aaPredicted RBP15.74■□□□□ 0.11
PRNP-201ENST00000379440 PPARDQ03181 441 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 MTMR3Q13615 1198 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 GRB14Q14449 540 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 GRIK4Q16099 956 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 ZNF667Q5HYK9 610 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 FOXR1Q6PIV2 292 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 CAPS2Q9BXY5 557 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
PRNP-201ENST00000379440 TCRBV5S1A1TA0A578 114 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 ECEL1O95672 775 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 CPP00450 1065 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 MMP3P08254 477 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 OGDHQ02218 1023 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 TMEM62Q0P6H9 643 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 ACVR2BQ13705 512 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 DUSP28Q4G0W2 176 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 PRAMEF19Q5SWL8 479 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 IFNLR1Q8IU57 520 aaPredicted RBP15.73■□□□□ 0.11
PRNP-201ENST00000379440 OR6J1Q8NGC5 347 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 RNF25Q96BH1 459 aaPredicted RBP15.73■□□□□ 0.11
PRNP-201ENST00000379440 TWNKQ96RR1 684 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 TINF2Q9BSI4 451 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 SMYD3Q9H7B4 428 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 F8VP50 259 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 ZEB2O60315 1214 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 SHOX2O60902 331 aaPredicted RBP15.73■□□□□ 0.11
PRNP-201ENST00000379440 LSM8O95777 96 aaKnown RBP15.73■□□□□ 0.11
PRNP-201ENST00000379440 MYZAPP0CAP1 466 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 IRAK1P51617 712 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 PPP1R7Q15435 360 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 UBAP2Q5T6F2 1119 aaKnown RBP15.73■□□□□ 0.11
PRNP-201ENST00000379440 SPRYD7Q5W111 196 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 CXorf38Q8TB03 319 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 EPB41L4BQ9H329 900 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 SETD4Q9NVD3 440 aa15.73■□□□□ 0.11
PRNP-201ENST00000379440 HMGXB4Q9UGU5 601 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms