RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 AKAP5P24588 427 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 ZNF132P52740 706 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 DYNLT1P63172 113 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 WASHC5Q12768 1159 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.58
NEDD9-201ENST00000379433 FAM47CQ5HY64 1035 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 CFAP58Q5T655 872 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 LDLRAD1Q5T700 205 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.58
NEDD9-201ENST00000379433 TCP11Q8WWU5 503 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 HVCN1Q96D96 273 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 SYT11Q9BT88 431 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 CDT1Q9H211 546 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 CDHR5Q9HBB8 845 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 CACNG4Q9UBN1 327 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 PCDHB2Q9Y5E7 798 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 DNAJC25-GNG10A0A024R161 153 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 GOLGA6L10A0A0M3HER8 536 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 LACTBL1A8MY62 500 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CSPG5O95196 566 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 TNNC2P02585 160 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CLTAP09496 248 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 TFDP1Q14186 410 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 HP1BP3Q5SSJ5 553 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ACAD10Q6JQN1 1059 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 TAPT1Q6NXT6 567 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ZNF606Q8WXB4 792 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ARL8AQ96BM9 186 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 HES6Q96HZ4 224 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 KIAA1586Q9HCI6 787 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ANKRD65E5RJM6 399 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 TLR3O15455 904 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 DDX3YO15523 660 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ZEB2O60315 1214 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 MYL3P08590 195 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 EFNA5P52803 228 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 DR1Q01658 176 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 AGAP9Q5VTM2 703 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 JADE1Q6IE81 842 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 EMC1Q8N766 993 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 UBA3Q8TBC4 463 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 MCEEQ96PE7 176 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ISCUQ9H1K1 167 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 AGAP1Q9UPQ3 857 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 UTP11Q9Y3A2 253 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CNTNAP2Q9UHC6 1331 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 KAT6AQ92794 2004 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 TARSL2A2RTX5 802 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 MYO1CO00159 1063 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 KRT10P13645 584 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ZNF24P17028 368 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 RFX1P22670 979 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 POLR2BP30876 1174 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 RPS6KA3P51812 740 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 EPHB4P54760 987 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 PLCB3Q01970 1234 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 PAK2Q13177 524 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ACVR2BQ13705 512 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 PPP1R7Q15435 360 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CLEC16AQ2KHT3 1053 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 PREPLQ4J6C6 727 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CEP85LQ5SZL2 805 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 SYCP2LQ5T4T6 812 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 MPZL3Q6UWV2 235 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 C7orf31Q8N865 590 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 RNF169Q8NCN4 708 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 DDX1Q92499 740 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 ANKRD36BP1Q96IX9 119 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 LPIN3Q9BQK8 851 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 SMYD3Q9H7B4 428 aa11.45□□□□□ -0.58
NEDD9-201ENST00000379433 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
NEDD9-201ENST00000379433 CTSHP09668 335 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 RTP1P59025 263 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 TUBB4BP68371 445 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 TNFAIP2Q03169 654 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 LAMC2Q13753 1193 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 CDO1Q16878 200 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 CAPN12Q6ZSI9 719 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 CATSPER4Q7RTX7 472 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 MCOLN2Q8IZK6 566 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 ZIM3Q96PE6 472 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 TINF2Q9BSI4 451 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 C10orf88Q9H8K7 445 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 ZWILCHQ9H900 591 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 PCSK1NQ9UHG2 260 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 COQ4Q9Y3A0 265 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 PHKA2P46019 1235 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 SLCO1A2P46721 670 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 GCNT1Q02742 428 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 GRIK4Q16099 956 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 PLEKHH3Q7Z736 793 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 BRSK2Q8IWQ3 736 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 C12orf29Q8N999 325 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 DNAJB3Q8WWF6 145 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms