RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CNOT3O75175 753 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GSTT2P0CG29 244 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GSTT2BP0CG30 244 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 CDK4P11802 303 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 NELFEP18615 380 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 BASP1P80723 227 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 AMIGO2Q86SJ2 522 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 PDIK1LQ8N165 341 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 JADE3Q92613 823 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 SLC5A5Q92911 643 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ALKBH8Q96BT7 664 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GANQ9H2C0 597 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 C12orf65Q9H3J6 166 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 A0A1W2PPM1 405 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 GNPATO15228 680 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 ARHGAP4P98171 946 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 SEC23AQ15436 765 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 MAPK6Q16659 721 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 LIN9Q5TKA1 542 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 DEFB107AQ8IZN7 70 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 TSPAN14Q8NG11 270 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CHST7Q9NS84 486 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 WARS2Q9UGM6 360 aaKnown RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CARD8Q9Y2G2 431 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 AP4B1Q9Y6B7 739 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 MYH15Q9Y2K3 1946 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 TCRBV7S2A1N4TA0A589 114 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 TM7SF2O76062 418 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 PROCP04070 461 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 SLC5A3P53794 718 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 GEMIN4P57678 1058 aaKnown RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 DYNLT1P63172 113 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 SFT2D3Q587I9 215 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CGB2Q6NT52 195 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 C3orf62Q6ZUJ4 267 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 FASTKD5Q7L8L6 764 aaKnown RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 EPB41L4BQ9H329 900 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 HOXA7P31268 230 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 ENTPD1P49961 510 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CTSWP56202 376 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 HIF1AQ16665 826 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 RGS21Q2M5E4 152 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 EGFLAMQ63HQ2 1017 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CAPSLQ8WWF8 208 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 SENP7Q9BQF6 1050 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 TXNDC16Q9P2K2 825 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CROTQ9UKG9 612 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 AIM2O14862 343 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 BIRC5O15392 142 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CAPN15O75808 1086 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 PDGFRBP09619 1106 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CCDC130P13994 396 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 FDFT1P37268 417 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 PTGIRP43119 386 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 ART3Q13508 389 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 CHI3L2Q15782 390 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 TMC5Q6UXY8 1006 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 UTS2BQ765I0 119 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 PPM1NQ8N819 430 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 INTS2Q9H0H0 1204 aaKnown RBP11.47□□□□□ -0.57
USP6NL-202ENST00000379237 PACSIN3Q9UKS6 424 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 HEY1Q9Y5J3 304 aa11.47□□□□□ -0.57
USP6NL-202ENST00000379237 MAN1A2O60476 641 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 TCN1P20061 433 aaPredicted RBP11.46□□□□□ -0.57
USP6NL-202ENST00000379237 MAPK10P53779 464 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 FLOT2Q14254 428 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 MYBPC2Q14324 1141 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 RSPH3Q86UC2 560 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 SEC14L1Q92503 715 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 E2F7Q96AV8 911 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 COA7Q96BR5 231 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 OSBPL6Q9BZF3 934 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 FAIMQ9NVQ4 179 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 BARHL2Q9NY43 387 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 TAS2R14Q9NYV8 317 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 SLC7A8Q9UHI5 535 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 XRN1Q8IZH2 1706 aaKnown RBP11.46□□□□□ -0.57
USP6NL-202ENST00000379237 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 MAGEC1O60732 1142 aa11.46□□□□□ -0.57
USP6NL-202ENST00000379237 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms