RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ABLIM3O94929 683 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 PRKCSHP14314 528 aaPredicted RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 KCNA5P22460 613 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 FMO5P49326 533 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 MYL7Q01449 175 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 ROR1Q01973 937 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 CETN1Q12798 172 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 SMARCB1Q12824 385 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 NFKBIBQ15653 356 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 LEXMQ3ZCV2 418 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 IRF2BP1Q8IU81 584 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 ADGRF2Q8IZF7 708 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 ATXN2LQ8WWM7 1075 aaKnown RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 MMS19Q96T76 1030 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 ACBD6Q9BR61 282 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 RAB20Q9NX57 234 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 MAGEC2Q9UBF1 373 aaPredicted RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 FBXW11Q9UKB1 542 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 BARX2Q9UMQ3 279 aaPredicted RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 DLX2Q07687 328 aaPredicted RBP14.19□□□□□ -0.14
CKAP2-202ENST00000378034 GPR17Q13304 367 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 UVSSAQ2YD98 709 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 CBWD6Q4V339 395 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 CBWD3Q5JTY5 395 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 CBWD5Q5RIA9 395 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 C11orf57Q6ZUT1 292 aaPredicted RBP14.19□□□□□ -0.14
CKAP2-202ENST00000378034 KREMEN2Q8NCW0 462 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 CMASQ8NFW8 434 aaPredicted RBP14.19□□□□□ -0.14
CKAP2-202ENST00000378034 SFXN1Q9H9B4 322 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 MAN1C1Q9NR34 630 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 NXF1Q9UBU9 619 aaKnown RBP14.19□□□□□ -0.14
CKAP2-202ENST00000378034 AFF4Q9UHB7 1163 aaKnown RBP14.19□□□□□ -0.14
CKAP2-202ENST00000378034 CD207Q9UJ71 328 aa14.19□□□□□ -0.14
CKAP2-202ENST00000378034 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 PAPLNO95428 1278 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 AFPP02771 609 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 CPB1P15086 417 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 ATF2P15336 505 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 PCSK1P29120 753 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 RBM10P98175 930 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 ITIH3Q06033 890 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 KCNH2Q12809 1159 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 WDR44Q5JSH3 913 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 CYP26C1Q6V0L0 522 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 CCDC149Q6ZUS6 474 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 BPIFA3Q9BQP9 254 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 RTP3Q9BQQ7 232 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 RHOBTB2Q9BYZ6 727 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 ZCWPW1Q9H0M4 648 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 DNAJC25Q9H1X3 360 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 ZDHHC7Q9NXF8 308 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 DDX43Q9NXZ2 648 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 NFE2L3Q9Y4A8 694 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 REV3LO60673 3130 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 CLSTN1O94985 981 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 EEF1GP26641 437 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 ARPP19P56211 112 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 MRPS5P82675 430 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 TSPY1Q01534 308 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 MYL5Q02045 173 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 LIN9Q5TKA1 542 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 SYCE2Q6PIF2 218 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 TCEAL8Q8IYN2 117 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 OR10T2Q8NGX3 314 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 C2orf15Q8WU43 125 aaKnown RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 KBTBD7Q8WVZ9 684 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 FUCA2Q9BTY2 467 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 SNX25Q9H3E2 840 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 FAM124BQ9H5Z6 455 aaPredicted RBP14.18□□□□□ -0.14
CKAP2-202ENST00000378034 HSFX1Q9UBD0 423 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 FAM50BQ9Y247 325 aa14.18□□□□□ -0.14
CKAP2-202ENST00000378034 SYCE3A1L190 88 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 ZMYND10O75800 440 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 HNRNPA1P09651 372 aaKnown RBP eCLIP14.17□□□□□ -0.14
CKAP2-202ENST00000378034 HOXA9P31269 272 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 ELF1P32519 619 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 GNL1P36915 607 aaPredicted RBP14.17□□□□□ -0.14
CKAP2-202ENST00000378034 MTIF2P46199 727 aaKnown RBP14.17□□□□□ -0.14
CKAP2-202ENST00000378034 SMAD4Q13485 552 aaKnown RBP14.17□□□□□ -0.14
CKAP2-202ENST00000378034 ANO6Q4KMQ2 910 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 SMRP1Q8NCR6 262 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 SEMA4DQ92854 862 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 BCO2Q9BYV7 579 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 NIF3L1Q9GZT8 377 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 S1PR5Q9H228 398 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 CYP3A43Q9HB55 503 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 CDH9Q9ULB4 789 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 POLIQ9UNA4 740 aa14.17□□□□□ -0.14
CKAP2-202ENST00000378034 H3BQ06 376 aaPredicted RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 CAVIN2O95810 425 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 POU2F2P09086 479 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 MAN2A1Q16706 1144 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms