RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 POLIQ9UNA4 740 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 TMEM191CA6NGB0 347 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 VTNP04004 478 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 NFICP08651 508 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 NUDT17P0C025 328 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 STAG3L1P0CL83 205 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 EIF4BP23588 611 aaKnown RBP21.43■■□□□ 1.02
VSX1-202ENST00000376709 POU5F1BQ06416 359 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 SLMAPQ14BN4 828 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 WDR72Q3MJ13 1102 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 ZNF667Q5HYK9 610 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 GPR142Q7Z601 462 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 SRLQ86TD4 932 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 HOOK3Q86VS8 718 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 ERICH1Q86X53 443 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 EXD1Q8NHP7 514 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 OSBPL8Q9BZF1 889 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 EPB41L4BQ9H329 900 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 HOMER3Q9NSC5 361 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 PCDHGC3Q9UN70 934 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 NOVA2Q9UNW9 492 aaKnown RBP21.43■■□□□ 1.02
VSX1-202ENST00000376709 ZSWIM8A7E2V4 1837 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 STRNO43815 780 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 CD19P15391 556 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 RAP1GAPP47736 663 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 TNFAIP2Q03169 654 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 KLF1Q13351 362 aaPredicted RBP21.43■■□□□ 1.02
VSX1-202ENST00000376709 FAM187BQ17R55 369 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 CCDC25Q86WR0 208 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 KATNBL1Q9H079 304 aa21.43■■□□□ 1.02
VSX1-202ENST00000376709 R3HDM2Q9Y2K5 976 aaKnown RBP21.43■■□□□ 1.02
VSX1-202ENST00000376709 RRP15Q9Y3B9 282 aaKnown RBP21.43■■□□□ 1.02
VSX1-202ENST00000376709 PCNTO95613 3336 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.42■■□□□ 1.02
VSX1-202ENST00000376709 LACTBL1A8MY62 500 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 SNAI1O95863 264 aaPredicted RBP21.42■■□□□ 1.02
VSX1-202ENST00000376709 SHBGP04278 402 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 MCF2P10911 925 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 MDH1P40925 334 aaKnown RBP21.42■■□□□ 1.02
VSX1-202ENST00000376709 CETN2P41208 172 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 SLC29A2Q14542 456 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 SYDE1Q6ZW31 735 aaPredicted RBP21.42■■□□□ 1.02
VSX1-202ENST00000376709 DPP9Q86TI2 863 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 C1orf127Q8N9H9 656 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 CPB2Q96IY4 423 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 SCLT1Q96NL6 688 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 SEMA4AQ9H3S1 761 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 KLHL11Q9NVR0 708 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 WHRNQ9P202 907 aa21.42■■□□□ 1.02
VSX1-202ENST00000376709 ITGB3P05106 788 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 FGFR4P22455 802 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 LSP1P33241 339 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 JADE1Q6IE81 842 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 ATL2Q8NHH9 583 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 NLRP7Q8WX94 980 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 RNF25Q96BH1 459 aaPredicted RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 PARK7Q99497 189 aaKnown RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 PDZD7Q9H5P4 517 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 SIX4Q9UIU6 781 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 RBM47A0AV96 593 aaKnown RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 H3BRB1 525 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 ECM2O94769 699 aaPredicted RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 MAGOHP61326 146 aaKnown RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 TRIP13Q15645 432 aaPredicted RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 AMHR2Q16671 573 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 CYP4A22Q5TCH4 519 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 WDTC1Q8N5D0 677 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 EMID1Q96A84 441 aaPredicted RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 SNF8Q96H20 258 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 TUT1Q9H6E5 874 aaKnown RBP21.41■■□□□ 1.02
VSX1-202ENST00000376709 LRRC4CQ9HCJ2 640 aa21.41■■□□□ 1.02
VSX1-202ENST00000376709 MED7O43513 233 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 RARGP13631 454 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 CDH5P33151 784 aaPredicted RBP21.4■■□□□ 1.02
VSX1-202ENST00000376709 CCT5P48643 541 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 TAP1Q03518 808 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 PTK6Q13882 451 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 GRB14Q14449 540 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 ZNF467Q7Z7K2 595 aaPredicted RBP21.4■■□□□ 1.02
VSX1-202ENST00000376709 FAM118BQ9BPY3 351 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 C16orf70Q9BSU1 422 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 STRIP2Q9ULQ0 834 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 COL1A2P08123 1366 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 TULP2O00295 520 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 ARF4P18085 180 aaPredicted RBP21.4■■□□□ 1.02
VSX1-202ENST00000376709 ITIH2P19823 946 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 CDH8P55286 799 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 ZNF252P-AS1Q0IIN9 211 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 NFX1Q12986 1120 aaKnown RBP21.4■■□□□ 1.02
VSX1-202ENST00000376709 CCNG2Q16589 344 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 IFNLR1Q8IU57 520 aaPredicted RBP21.4■■□□□ 1.02
VSX1-202ENST00000376709 LINC01465Q8N7H1 131 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 C3orf20Q8ND61 904 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 RBM41Q96IZ5 413 aaKnown RBP21.4■■□□□ 1.02
VSX1-202ENST00000376709 BCO2Q9BYV7 579 aa21.4■■□□□ 1.02
VSX1-202ENST00000376709 TCRBV5S1A1TA0A578 114 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 DCDC2CA8MYV0 355 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 F8VP50 259 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 PI4K2BG5E9Z4 385 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 ATF2P15336 505 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms