RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ANXA11P50995 505 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 NR1H2P55055 460 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 RMND5BQ96G75 393 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 MROH7-TTC4A0A0A0MT08 1334 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 RFC5P40937 340 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 KCNV2Q8TDN2 545 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 SEPT1Q8WYJ6 367 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 MRPL48Q96GC5 212 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 NDEL1Q9GZM8 345 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 MAPRE3Q9UPY8 281 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 AURKCQ9UQB9 309 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 ATP6V1C1P21283 382 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 ALDH18A1P54886 795 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 NAA30Q147X3 362 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 LARGE2Q8N3Y3 721 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 OSCP1Q8WVF1 389 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 MYRFQ9Y2G1 1151 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 RPLP2P05387 115 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 NSUN6Q8TEA1 469 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 EEF2KMTQ96G04 330 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 GANQ9H2C0 597 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 ALADP13716 330 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 GCLMP48507 274 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PRAMEP78395 509 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PTPROQ16827 1216 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 RASGRP4Q8TDF6 673 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 NCK2O43639 380 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 IGKV5-2P06315 115 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 HOXC6P09630 235 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 TRIM65Q6PJ69 517 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 ARCQ7LC44 396 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 SNX19Q92543 992 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 SUGCTQ9HAC7 445 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 E5RI56 91 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ITGA8P53708 1063 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 AGAP9Q5VTM2 703 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ST13P5Q8NFI4 369 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ZBTB9Q96C00 473 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 TBCBQ99426 244 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SEC24CP53992 1094 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PDXDC2PQ6P474 469 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 FAM81AQ8TBF8 368 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SKA2Q8WVK7 121 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 F8VZ95 297 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 CLCN2P51788 898 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 C9orf16Q9BUW7 83 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SORBS3O60504 671 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 RPL5P46777 297 aaKnown RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 CDH6P55285 790 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 LXNQ9BS40 222 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PIH1D3Q9NQM4 214 aaKnown RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PTPAQ15257 358 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PRR23CQ6ZRP0 262 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 CYB5R4Q7L1T6 521 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 DDX42Q86XP3 938 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 KYQ8NBH2 561 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 NEUROG2Q9H2A3 272 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 NGRNQ9NPE2 291 aaKnown RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 THAP1Q9NVV9 213 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 RBAKQ9NYW8 714 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 DEPDC5O75140 1603 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ASNA1O43681 348 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ABCB1P08183 1280 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 MAD2L1Q13257 205 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 C1DQ13901 141 aaKnown RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 FASTKD1Q53R41 847 aaKnown RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ZKSCAN4Q969J2 545 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 RAD21L1Q9H4I0 556 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 CLUHO75153 1309 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SNAP91O60641 907 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 RAP1GAPP47736 663 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 DLG4P78352 724 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PPP6R3Q5H9R7 873 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 STKLD1Q8NE28 680 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PCDH9Q9HC56 1237 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 C6orf203Q9P0P8 240 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 LOC102724428A0A0B4J2F2 783 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 RBP1P09455 135 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 KRT6CP48668 564 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SIK1P57059 783 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SPDYE2Q495Y8 402 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 LRRC34Q8IZ02 419 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 CASKIN2Q8WXE0 1202 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 HSPH1Q92598 858 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 LZTS3O60299 673 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ANXA9O76027 345 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 KLRC1P26715 233 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PEX3P56589 373 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms