RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 FETUBQ9UGM5 382 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 GJA3Q9Y6H8 435 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 MYH9P35579 1960 aaKnown RBP18.97■□□□□ 0.63
PHF1-201ENST00000374512 RLFQ13129 1914 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 RGS20O76081 388 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 VNN1O95497 513 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 CD58P19256 250 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 ALDH3A1P30838 453 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 POLGP54098 1239 aaPredicted RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 TAP1Q03518 808 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 TMEM270Q6UE05 265 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 PHLDB2Q86SQ0 1253 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 ZNF280CQ8ND82 737 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 ELMO3Q96BJ8 720 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 STAMBPL1Q96FJ0 436 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 SLITRK1Q96PX8 696 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 POLR3FQ9H1D9 316 aaPredicted RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 PNMA3Q9UL41 463 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 SHOC2Q9UQ13 582 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 ZNF148Q9UQR1 794 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 TMEM191CA6NGB0 347 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 FOXO6A8MYZ6 492 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 FZD9O00144 591 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 ALOX15BO15296 676 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 DCTN3O75935 186 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 CALB1P05937 261 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 TMEM191BP0C7N4 346 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 MMP8P22894 467 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 SSR1P43307 286 aaKnown RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 PRKCEQ02156 737 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 MGAT5Q09328 741 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 ZC3H12AQ5D1E8 599 aaKnown RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 CYP4F22Q6NT55 531 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 LLGL2Q6P1M3 1020 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 RBBP8NLQ8NC74 664 aaPredicted RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 SMC6Q96SB8 1091 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 TRABDQ9H4I3 376 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 DDX56Q9NY93 547 aaKnown RBP18.96■□□□□ 0.63
PHF1-201ENST00000374512 ZNF112Q9UJU3 913 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 USTQ9Y2C2 406 aa18.96■□□□□ 0.63
PHF1-201ENST00000374512 STAM2O75886 525 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 LSM8O95777 96 aaKnown RBP18.95■□□□□ 0.62
PHF1-201ENST00000374512 GCAP28676 217 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 CCNG1P51959 295 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 PDK4Q16654 411 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 C2CD6Q53TS8 623 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 XKR3Q5GH77 459 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 PCGF5Q86SE9 256 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 CCDC60Q8IWA6 550 aaPredicted RBP18.95■□□□□ 0.62
PHF1-201ENST00000374512 NSMCE1Q8WV22 266 aa18.95■□□□□ 0.62
PHF1-201ENST00000374512 NKD2Q969F2 451 aaPredicted RBP18.95■□□□□ 0.62
PHF1-201ENST00000374512 ZNF214Q9UL59 606 aaPredicted RBP18.95■□□□□ 0.62
PHF1-201ENST00000374512 ITGAVP06756 1048 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 ARSEP51690 589 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 AP3M2P53677 418 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 CLNS1AP54105 237 aaKnown RBP18.94■□□□□ 0.62
PHF1-201ENST00000374512 ACTR2P61160 394 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 SP4Q02446 784 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 PDE4CQ08493 712 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 MYO1EQ12965 1108 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 CENPUQ71F23 418 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 AGGF1Q8N302 714 aaeCLIP18.94■□□□□ 0.62
PHF1-201ENST00000374512 INPP5DQ92835 1189 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 TMEM237Q96Q45 408 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 CGRRF1Q99675 332 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 FRMD8P1Q9BZ68 369 aaPredicted RBP18.94■□□□□ 0.62
PHF1-201ENST00000374512 MAF1Q9H063 256 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 LRMDAQ9H2I8 198 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 RBAKQ9NYW8 714 aaPredicted RBP18.94■□□□□ 0.62
PHF1-201ENST00000374512 DNPEPQ9ULA0 475 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 ZNF132P52740 706 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 VCPP55072 806 aaKnown RBP18.94■□□□□ 0.62
PHF1-201ENST00000374512 NLRP11P59045 1033 aaKnown RBP18.94■□□□□ 0.62
PHF1-201ENST00000374512 GNPTABQ3T906 1256 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 ACCSLQ4AC99 568 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 DAB2IPQ5VWQ8 1189 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 ABHD15Q6UXT9 468 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 MIEF2Q96C03 454 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 C12orf42Q96LP6 360 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 ZNF518BQ9C0D4 1074 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 APOBEC3GQ9HC16 384 aaKnown RBP18.94■□□□□ 0.62
PHF1-201ENST00000374512 PCDH9Q9HC56 1237 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 PICK1Q9NRD5 415 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 PHTF1Q9UMS5 762 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 ADAMTS5Q9UNA0 930 aa18.94■□□□□ 0.62
PHF1-201ENST00000374512 PTPRAP18433 802 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 MOGSQ13724 837 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 PIGHQ14442 188 aaPredicted RBP18.93■□□□□ 0.62
PHF1-201ENST00000374512 SPOPLQ6IQ16 392 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 PASD1Q8IV76 773 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 LRRC37BQ96QE4 947 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 ETNK1Q9HBU6 452 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 CYP39A1Q9NYL5 469 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 EFR3BQ9Y2G0 817 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 L3MBTL1Q9Y468 752 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 KRT1P04264 644 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 CFHP08603 1231 aa18.93■□□□□ 0.62
PHF1-201ENST00000374512 PECAM1P16284 738 aaPredicted RBP18.93■□□□□ 0.62
PHF1-201ENST00000374512 KRT15P19012 456 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms