RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SESTD1Q86VW0 696 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 RASSF3Q86WH2 238 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 CATSPER3Q86XQ3 398 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 C1orf131Q8NDD1 294 aaKnown RBP11.13□□□□□ -0.63
PGK1-201ENST00000373316 PPHLN1Q8NEY8 458 aaKnown RBP11.13□□□□□ -0.63
PGK1-201ENST00000373316 BRD8Q9H0E9 1235 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 LRFN2Q9ULH4 789 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 GRID1Q9ULK0 1009 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 NEU2Q9Y3R4 380 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 CDY2AQ9Y6F7 541 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
PGK1-201ENST00000373316 SFI1A8K8P3 1242 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 SLCO1B7G3V0H7 640 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TMCC1O94876 653 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 PRKCIP41743 596 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 HSD17B4P51659 736 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 NCOA4Q13772 614 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 PSMD6Q15008 389 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 CCNG2Q16589 344 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 PTPROQ16827 1216 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TRIM65Q6PJ69 517 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 CCDC126Q96EE4 140 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 SPRP35270 261 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 HDAC4P56524 1084 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 IRX1P78414 480 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 SATB1Q01826 763 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TRIP13Q15645 432 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 SV2CQ496J9 727 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 ZNF484Q5JVG2 852 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 NLRP9Q7RTR0 991 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 MFN1Q8IWA4 741 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 ICA1LQ8NDH6 482 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 ATXN2LQ8WWM7 1075 aaKnown RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 PBXIP1Q96AQ6 731 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TBX20Q9UMR3 447 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 A0A0G2JND7 137 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 NCF2P19878 526 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 MAGEA4P43358 317 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 SESN3P58005 492 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.632e-10■■■□□ 15.3
PGK1-201ENST00000373316 NFIL3Q16649 462 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 C1orf146Q5VVC0 180 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 ZDHHC17Q8IUH5 632 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TNIP2Q8NFZ5 429 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 PGBD4Q96DM1 585 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 NLRP4Q96MN2 994 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TSPAN18Q96SJ8 248 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TSSK1BQ9BXA7 367 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 TRIM45Q9H8W5 580 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 FBXO28Q9NVF7 368 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 SNUPNO95149 360 aaKnown RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 PMLP29590 882 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 PLA2G4AP47712 749 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 PTENP60484 403 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
PGK1-201ENST00000373316 SLC10A4Q96EP9 437 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 GCNAQ96QF7 691 aa11.12□□□□□ -0.63
PGK1-201ENST00000373316 GH1P01241 217 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 TRIM49P0CI25 452 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 TRIM49CP0CI26 452 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 MYBP10242 640 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 COMTP21964 271 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 KLRC1P26715 233 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 INPP5AQ14642 412 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 ATP6V1E2Q96A05 226 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
PGK1-201ENST00000373316 PPWD1Q96BP3 646 aaKnown RBP11.11□□□□□ -0.63
PGK1-201ENST00000373316 FSD1LQ9BXM9 530 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 ACTL7BQ9Y614 415 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 APOEP02649 317 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 NR3C2P08235 984 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 MARK3P27448 753 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 HSD17B3P37058 310 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 HERVK_113P62684 666 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 GIT2Q14161 759 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 SNX17Q15036 470 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 IL17AQ16552 155 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 PDZD8Q8NEN9 1154 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 CGRRF1Q99675 332 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 FAM124BQ9H5Z6 455 aaPredicted RBP11.11□□□□□ -0.63
PGK1-201ENST00000373316 GDF3Q9NR23 364 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 RPL26L1Q9UNX3 145 aaKnown RBP11.11□□□□□ -0.63
PGK1-201ENST00000373316 L3MBTL1Q9Y468 752 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 MYH6P13533 1939 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 GNGT2O14610 69 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 HGSO14964 777 aaPredicted RBP11.11□□□□□ -0.63
PGK1-201ENST00000373316 GPD1P21695 349 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 IFNA8P32881 189 aa11.11□□□□□ -0.63
PGK1-201ENST00000373316 CDH6P55285 790 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms