RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TMEM253P0C7T8 217 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 NPEPPSP55786 919 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 ATF7IP2Q5U623 682 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 IFNEQ86WN2 208 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 TMEM8AQ9HCN3 771 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 SPATA31E1Q6ZUB1 1445 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 EIF4E1BA6NMX2 242 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 DYNC1LI2O43237 492 aaPredicted RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 H2AFYO75367 372 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 WBP4O75554 376 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 SOAT2O75908 522 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 MAGEA4P43358 317 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 RANBP1P43487 201 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 DPYDQ12882 1025 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 GLB1LQ6UWU2 654 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 EXOSC4Q9NPD3 245 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 ADGRA2Q96PE1 1338 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 RHOBTB1O94844 696 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 MLNP12872 115 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 OSBPL8Q9BZF1 889 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 GOLPH3Q9H4A6 298 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 KRCC1Q9NPI7 259 aaPredicted RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 BATF3Q9NR55 127 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 PRMT7Q9NVM4 692 aaPredicted RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 MARCOQ9UEW3 520 aaPredicted RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 SNAP23O00161 211 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 CYTH3O43739 400 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 EXTL3O43909 919 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 HSPA13P48723 471 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 NCKAP1LP55160 1127 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 ARHGAP15Q53QZ3 475 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 ZRANB3Q5FWF4 1079 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 E4F1Q66K89 784 aaPredicted RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 CHMP1BQ7LBR1 199 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 IPMKQ8NFU5 416 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 MS4A14Q96JA4 679 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 C9orf72Q96LT7 481 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 APOL5Q9BWW9 433 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 CTSHP09668 335 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 PNPLA4P41247 253 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 ANXA11P50995 505 aaKnown RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 KLC1Q07866 573 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 KBTBD12Q3ZCT8 623 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 TRIM65Q6PJ69 517 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.03□□□□□ -0.48
VCL-202ENST00000372755 RASGRP2Q7LDG7 609 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 JAMLQ86YT9 394 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 SPATA18Q8TC71 538 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 USP6NLQ92738 828 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 WDR24Q96S15 920 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 CCT8L2Q96SF2 557 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 BRD8Q9H0E9 1235 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 EPC1Q9H2F5 836 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 DBR1Q9UK59 544 aaKnown RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 A0A1W2PQJ5 194 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 ZNF185O15231 689 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 EIF3HO15372 352 aaKnown RBP eCLIP12.03□□□□□ -0.48
VCL-202ENST00000372755 CCND1P24385 295 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 CLK1P49759 484 aaKnown RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 POU4F1Q01851 419 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 GOLGA7BQ2TAP0 167 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 MGAT5BQ3V5L5 792 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 WDR48Q8TAF3 677 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 WNK4Q96J92 1243 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 SH3GL3Q99963 347 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 THTPAQ9BU02 230 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 NMRK1Q9NWW6 199 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 HMGB3O15347 200 aaKnown RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 ENTPD3O75355 529 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 SLC25A27O95847 323 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 PGK2P07205 417 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 PYGMP11217 842 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 CHRM3P20309 590 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 GGT7Q9UJ14 662 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 VWA5AO00534 786 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 ANXA9O76027 345 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 KCNA3P22001 575 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 MZF1P28698 734 aaPredicted RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 SLC9A5Q14940 896 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 TRIP10Q15642 601 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 TTLL9Q3SXZ7 439 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 C3orf62Q6ZUJ4 267 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 KRT78Q8N1N4 520 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 USP13Q92995 863 aaPredicted RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 E2F7Q96AV8 911 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
VCL-202ENST00000372755 LBHD1Q9BQE6 289 aaPredicted RBP12.03□□□□□ -0.48
VCL-202ENST00000372755 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms