RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 COL1A2P08123 1366 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 ARHGEF35A5YM69 484 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 LUC7L3O95232 432 aaKnown RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 GJB6O95452 261 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 C22orf31O95567 290 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 VIMP08670 466 aaKnown RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 RARAP10276 462 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 HOXC8P31273 242 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 HOXD13P35453 343 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 POLGP54098 1239 aaPredicted RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 PLTPP55058 493 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 NCALDP61601 193 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 AUHQ13825 339 aaKnown RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 MYBPC2Q14324 1141 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 DCAF17Q5H9S7 520 aaPredicted RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 EFCAB12Q6NXP0 572 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 SFR1Q86XK3 245 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 APLFQ8IW19 511 aaPredicted RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 CEP120Q8N960 986 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 CFAP61Q8NHU2 1237 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 DNAJB3Q8WWF6 145 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 WNT8BQ93098 351 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 PRMT1Q99873 361 aaKnown RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 DBR1Q9UK59 544 aaKnown RBP12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 ARL2BPQ9Y2Y0 163 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 PCDHA3Q9Y5H8 950 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 DNAH12Q6ZR08 3092 aa12.16□□□□□ -0.46
TSPAN1-201ENST00000372003 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 MAGEB2O15479 319 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 ATP2C2O75185 946 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TCEA3O75764 348 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 ATP5HO75947 161 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 ANP32DO95626 131 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 EYA4O95677 639 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SYN1P17600 705 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 THPOP40225 353 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 CLCN3P51790 818 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 CASP5P51878 434 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 COPS2P61201 443 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TMEM62Q0P6H9 643 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 PTK7Q13308 1070 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 DRAP1Q14919 205 aaPredicted RBP12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SEL1L2Q5TEA6 688 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TCERG1LQ5VWI1 586 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 RNF43Q68DV7 783 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 STXBP4Q6ZWJ1 553 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SERINC5Q86VE9 423 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 NSMCE1Q8WV22 266 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TCP11Q8WWU5 503 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SLC7A3Q8WY07 619 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 REEP2Q9BRK0 252 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TRIM31Q9BZY9 425 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TRIM7Q9C029 511 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 OSGEPQ9NPF4 335 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 WHRNQ9P202 907 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SEL1LQ9UBV2 794 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 PRKAG2Q9UGJ0 569 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 DNAJC12Q9UKB3 198 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 AJAP1Q9UKB5 411 aaPredicted RBP12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 SNX24Q9Y343 169 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 NR2E1Q9Y466 385 aa12.15□□□□□ -0.46
TSPAN1-201ENST00000372003 TLDC2A0PJX2 215 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TRIM43BA6NCK2 446 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 E7ENQ6 273 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TBCAO75347 108 aaKnown RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 MAFO75444 373 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 CLTAP09496 248 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 FMO5P49326 533 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 IFI35P80217 286 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 CAV1Q03135 178 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 NAA25Q14CX7 972 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 CMPK2Q5EBM0 449 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ASRGL1Q7L266 308 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TBC1D1Q86TI0 1168 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 GLYCTKQ8IVS8 523 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TEX9Q8N6V9 391 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 PRELID2Q8N945 189 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 DHX38Q92620 1227 aaKnown RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TMEM143Q96AN5 459 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 TRIM43Q96BQ3 446 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ZNF668Q96K58 619 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ZSWIM1Q9BR11 485 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 HIPK3Q9H422 1215 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ECT2Q9H8V3 914 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms