RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PDCD6IPQ8WUM4 868 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 CGRRF1Q99675 332 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 SPON1Q9HCB6 807 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 CHORDC1Q9UHD1 332 aaPredicted RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 LOC102724159A0A0B4J2E5 919 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PJA2O43164 708 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 POLE2P56282 527 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PWP2Q15269 919 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PRAMEF18Q5VWM3 479 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 ANKZF1Q9H8Y5 726 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 FAM49BQ9NUQ9 324 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 BNIP3LO60238 219 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PPFIA2O75334 1257 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PROSCO94903 275 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 LSM8O95777 96 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PHEXP78562 749 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 CYP24A1Q07973 514 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 HIC1Q14526 733 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PPHLN1Q8NEY8 458 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 FBXO25Q8TCJ0 367 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 ULK4Q96C45 1275 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 AGAP3Q96P47 875 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 NSMCE4AQ9NXX6 385 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 GRID1Q9ULK0 1009 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 UBQLN1Q9UMX0 589 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 MTO1Q9Y2Z2 717 aaKnown RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 NFIBO00712 420 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 GRAP2O75791 330 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 FKBP1AP62942 108 aaKnown RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 LAMB3Q13751 1172 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 ZNF484Q5JVG2 852 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 OTOP1Q7RTM1 612 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 SPATA2LQ8IUW3 424 aaPredicted RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 ERP27Q96DN0 273 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 KIAA1683Q9H0B3 1180 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 VPS33BQ9H267 617 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 POLBP06746 335 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 CPB1P15086 417 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 CORO7P57737 925 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 DGKDQ16760 1214 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 DCAF4L1Q3SXM0 396 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 EXD1Q8NHP7 514 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 EML4Q9HC35 981 aaKnown RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 OSGEPQ9NPF4 335 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 PXMP2Q9NR77 195 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 METTL5Q9NRN9 209 aaKnown RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 GAKO14976 1311 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 E5RI56 91 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 DFFAO00273 331 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 ITGB3P05106 788 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 VDRP11473 427 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 RRM1P23921 792 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 SMTNL2Q2TAL5 461 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 MPZL3Q6UWV2 235 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 CLMNQ96JQ2 1002 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 FAM118BQ9BPY3 351 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 MRIQ9BWK5 157 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 NPHS2Q9NP85 383 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 ADA2Q9NZK5 511 aa12.4□□□□□ -0.42
DEPDC1-201ENST00000370966 SLITRK3O94933 977 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 VCAM1P19320 739 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 PTENP60484 403 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 PDE1CQ14123 709 aaPredicted RBP12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 TFDP3Q5H9I0 405 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 RABGAP1LQ5R372 815 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 RGS9BPQ6ZS82 235 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 LRRC6Q86X45 466 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 MYCBPAPQ8TBZ2 947 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC5A5Q92911 643 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 TLR10Q9BXR5 811 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP4F11Q9HBI6 524 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 TMBIM4Q9HC24 238 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 PRKAG2Q9UGJ0 569 aa12.4□□□□□ -0.43
DEPDC1-201ENST00000370966 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 CETPP11597 493 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 TAF6P49848 677 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 VEPH1Q14D04 833 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 CCNG2Q16589 344 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 FKBP1CQ5VVH2 108 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 UBA3Q8TBC4 463 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 ARL8AQ96BM9 186 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms