RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 GUF1Q8N442 669 aaKnown RBP13.11□□□□□ -0.31
TMEM56-201ENST00000370203 IGDCC4Q8TDY8 1250 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■□□□□ 8.8
TMEM56-201ENST00000370203 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 IMPDH2P12268 514 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 COMTP21964 271 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 ZBTB17Q13105 803 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
TMEM56-201ENST00000370203 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
TMEM56-201ENST00000370203 MYL4P12829 197 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 UCHL3P15374 230 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 AP2B1P63010 937 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 LY6KQ17RY6 165 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 GALNTL6Q49A17 601 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 VN1R5Q7Z5H4 357 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 RNF180Q86T96 592 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
TMEM56-201ENST00000370203 DTNAQ9Y4J8 743 aa13.11□□□□□ -0.31
TMEM56-201ENST00000370203 B3GAT3O94766 335 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 LVRNQ6Q4G3 990 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 SARM1Q6SZW1 724 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 CLEC4FQ8N1N0 589 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 KRT4P19013 534 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 GLRBP48167 497 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 PTK7Q13308 1070 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 KCNV1Q6PIU1 500 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 CHMP1BQ7LBR1 199 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 OSGEPL1Q9H4B0 414 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 CRLS1Q9UJA2 301 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 GPD1P21695 349 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 OCA2Q04671 838 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 SNX17Q15036 470 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 C16orf86Q6ZW13 317 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ACTR5Q9H9F9 607 aaPredicted RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ADAM21Q9UKJ8 722 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 LOC100653049A0A140TA62 436 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 KRT34O76011 436 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 MYL2P10916 166 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 RPRD1AQ96P16 312 aaPredicted RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 CST8O60676 142 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 SGPL1O95470 568 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 TSSK1BQ9BXA7 367 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
TMEM56-201ENST00000370203 EPHB2P29323 1055 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 PGM1P36871 562 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 CAV1Q03135 178 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 ANGPT1Q15389 498 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 KIF2BQ8N4N8 673 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 RIN3Q8TB24 985 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 HECW2Q9P2P5 1572 aa13.1□□□□□ -0.31
TMEM56-201ENST00000370203 PDXKO00764 312 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 GYS1P13807 737 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 VSNL1P62760 191 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 CPSF1Q10570 1443 aaKnown RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 SKAP2O75563 359 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 AP1G2O75843 785 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 DPYDQ12882 1025 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 NOTUMQ6P988 496 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 SPATA4Q8NEY3 305 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 MTBPQ96DY7 904 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 CYP4F12Q9HCS2 524 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 MAP3K13O43283 966 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 AKAP5P24588 427 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 RAP1GDS1P52306 607 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ARHGAP15Q53QZ3 475 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ATP6V1G3Q96LB4 118 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 GLT1D1Q96MS3 346 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 CRAMP1Q96RY5 1269 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 NDE1Q9NXR1 346 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 POLLQ9UGP5 575 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 MRFAP1Q9Y605 127 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms