RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 AKR1B15C9JRZ8 316 aaPredicted RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 H0YCG3 227 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NCK2O43639 380 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 ARIH2O95376 493 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TXNP10599 105 aaKnown RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 SKILP12757 684 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NME1P15531 152 aaKnown RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 HOXD13P35453 343 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TCF7P36402 384 aaPredicted RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 SLC26A2P50443 739 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 STAT5BP51692 787 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 GUCY2FP51841 1108 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NCKAP1LP55160 1127 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NPEPPSP55786 919 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 SNRPFP62306 86 aaKnown RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 CCZ1BP86790 482 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 CCZ1P86791 482 aaPredicted RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 LRMPQ12912 555 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 MIIPQ5JXC2 388 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 CCDC51Q96ER9 411 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 ERGIC2Q96RQ1 377 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 SLC9A7Q96T83 725 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 GBP3Q9H0R5 595 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NRBP2Q9NSY0 501 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 GMIPQ9P107 970 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 REV1Q9UBZ9 1251 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TBX21Q9UL17 535 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 FAM184BQ9ULE4 1060 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 SIP14410 1827 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TMEM150BA6NC51 233 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 SLC22A31A6NKX4 558 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 KATNA1O75449 491 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 EPB41P11171 864 aaKnown RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 ID4P47928 161 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 EPHB4P54760 987 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 MCL1Q07820 350 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TBC1D8BQ0IIM8 1120 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 INPP5AQ14642 412 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 PPP2R5AQ15172 486 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 VWA3BQ502W6 1294 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 FAM209AQ5JX71 171 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 WIPI1Q5MNZ9 446 aaPredicted RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 SCARA3Q6AZY7 606 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 PLPPR4Q7Z2D5 763 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 FRMD5Q7Z6J6 570 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 STRA8Q7Z7C7 330 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 ATL2Q8NHH9 583 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 PANX2Q96RD6 677 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 GPR20Q99678 358 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NUP58Q9BVL2 599 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NAA15Q9BXJ9 866 aaKnown RBP9.49□□□□□ -0.89
TPM3-213ENST00000368545 EPN3Q9H201 632 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 NDST4Q9H3R1 872 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 CACNA2D2Q9NY47 1150 aa9.49□□□□□ -0.89
TPM3-213ENST00000368545 CCDC163A0A0D9SF12 145 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 NKRFO15226 690 aaKnown RBP eCLIP9.48□□□□□ -0.89
TPM3-213ENST00000368545 GAS2O43903 313 aaKnown RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 MFAP3LO75121 409 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 NR3C1P04150 777 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 CCNFP41002 786 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 POLGP54098 1239 aaPredicted RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 GTF2BQ00403 316 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 EMC2Q15006 297 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 YOD1Q5VVQ6 348 aaPredicted RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 MAEAQ7L5Y9 396 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 NLRC3Q7RTR2 1065 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 SLC7A3Q8WY07 619 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 EEF2KMTQ96G04 330 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 IFT74Q96LB3 600 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 SPATA33Q96N06 139 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 ACCSQ96QU6 501 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 PCYT2Q99447 389 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 SH2D3AQ9BRG2 576 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 NTPCRQ9BSD7 190 aaKnown RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 ABHD16BQ9H3Z7 469 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 DHX33Q9H6R0 707 aaKnown RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 RRAGDQ9NQL2 400 aaPredicted RBP9.48□□□□□ -0.89
TPM3-213ENST00000368545 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 MAPRE3Q9UPY8 281 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 TELO2Q9Y4R8 837 aa9.48□□□□□ -0.89
TPM3-213ENST00000368545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 TGFB1I1O43294 461 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GH1P01241 217 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GYPCP04921 128 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GSTP1P09211 210 aaKnown RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 RARBP10826 455 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 ACTN1P12814 892 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 PEX3P56589 373 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 HSDL1Q3SXM5 330 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 ZC2HC1CQ53FD0 456 aaPredicted RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 FIGNQ5HY92 759 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GJC2Q5T442 439 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms